-- MySQL dump 10.10
--
-- Host: localhost    Database: canFam1
-- ------------------------------------------------------
-- Server version	5.0.21

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--
-- Table structure for table `snp125`
--

DROP TABLE IF EXISTS `snp125`;
CREATE TABLE `snp125` (
  `bin` smallint(5) unsigned NOT NULL default '0',
  `chrom` varchar(15) NOT NULL default '',
  `chromStart` int(10) unsigned NOT NULL default '0',
  `chromEnd` int(10) unsigned NOT NULL default '0',
  `name` varchar(15) NOT NULL default '',
  `score` smallint(5) unsigned NOT NULL default '0',
  `strand` enum('?','+','-') NOT NULL default '?',
  `refNCBI` blob NOT NULL,
  `refUCSC` blob NOT NULL,
  `observed` varchar(255) NOT NULL default '',
  `molType` enum('unknown','genomic','cDNA') NOT NULL default 'unknown',
  `class` enum('unknown','single','in-del','het','microsatellite','named','no var','mixed','mnp','insertion','deletion') NOT NULL default 'unknown',
  `valid` set('unknown','by-cluster','by-frequency','by-submitter','by-2hit-2allele','by-hapmap') NOT NULL default 'unknown',
  `avHet` float NOT NULL default '0',
  `avHetSE` float NOT NULL default '0',
  `func` set('unknown','locus','coding','coding-synon','coding-nonsynon','untranslated','intron','splice-site','cds-reference') NOT NULL default 'unknown',
  `locType` enum('unknown','range','exact','between','rangeInsertion','rangeSubstitution','rangeDeletion') NOT NULL default 'unknown',
  `weight` int(10) unsigned NOT NULL default '0',
  KEY `name` (`name`),
  KEY `chrom` (`chrom`,`bin`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1;

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/*!40111 SET SQL_NOTES=@OLD_SQL_NOTES */;

