-- MySQL dump 10.11
--
-- Host: localhost    Database: hg18
-- ------------------------------------------------------
-- Server version	5.0.67

/*!40101 SET @OLD_CHARACTER_SET_CLIENT=@@CHARACTER_SET_CLIENT */;
/*!40101 SET @OLD_CHARACTER_SET_RESULTS=@@CHARACTER_SET_RESULTS */;
/*!40101 SET @OLD_COLLATION_CONNECTION=@@COLLATION_CONNECTION */;
/*!40101 SET NAMES utf8 */;
/*!40103 SET @OLD_TIME_ZONE=@@TIME_ZONE */;
/*!40103 SET TIME_ZONE='+00:00' */;
/*!40101 SET @OLD_SQL_MODE=@@SQL_MODE, SQL_MODE='' */;
/*!40111 SET @OLD_SQL_NOTES=@@SQL_NOTES, SQL_NOTES=0 */;

--
-- Table structure for table `snp130`
--

DROP TABLE IF EXISTS `snp130`;
SET @saved_cs_client     = @@character_set_client;
SET character_set_client = utf8;
CREATE TABLE `snp130` (
  `bin` smallint(5) unsigned NOT NULL default '0',
  `chrom` varchar(31) NOT NULL default '',
  `chromStart` int(10) unsigned NOT NULL default '0',
  `chromEnd` int(10) unsigned NOT NULL default '0',
  `name` varchar(15) NOT NULL default '',
  `score` smallint(5) unsigned NOT NULL default '0',
  `strand` enum('+','-') default NULL,
  `refNCBI` blob NOT NULL,
  `refUCSC` blob NOT NULL,
  `observed` varchar(255) NOT NULL default '',
  `molType` enum('unknown','genomic','cDNA') default NULL,
  `class` enum('unknown','single','in-del','het','microsatellite','named','mixed','mnp','insertion','deletion') NOT NULL default 'unknown',
  `valid` set('unknown','by-cluster','by-frequency','by-submitter','by-2hit-2allele','by-hapmap','by-1000genomes') NOT NULL default 'unknown',
  `avHet` float NOT NULL default '0',
  `avHetSE` float NOT NULL default '0',
  `func` set('unknown','coding-synon','intron','near-gene-3','near-gene-5','nonsense','missense','frameshift','untranslated-3','untranslated-5') NOT NULL default 'unknown',
  `locType` enum('range','exact','between','rangeInsertion','rangeSubstitution','rangeDeletion') default NULL,
  `weight` int(10) unsigned NOT NULL default '0',
  KEY `name` (`name`),
  KEY `chrom` (`chrom`,`bin`)
) ENGINE=MyISAM DEFAULT CHARSET=latin1;
SET character_set_client = @saved_cs_client;

/*!40103 SET TIME_ZONE=@OLD_TIME_ZONE */;

/*!40101 SET SQL_MODE=@OLD_SQL_MODE */;
/*!40101 SET CHARACTER_SET_CLIENT=@OLD_CHARACTER_SET_CLIENT */;
/*!40101 SET CHARACTER_SET_RESULTS=@OLD_CHARACTER_SET_RESULTS */;
/*!40101 SET COLLATION_CONNECTION=@OLD_COLLATION_CONNECTION */;
/*!40111 SET SQL_NOTES=@OLD_SQL_NOTES */;

-- Dump completed on 2009-09-20 16:54:17
