Vertebrate Genomes assembly hubs

Assemblies from NCBI/Genbank/Refseq sources, subset of other vertebrates only.

How to view the assembly of interest

The links to the genome browser in the table below will attach that one specific assembly to the genome browser. Use the links in the column labeled common name and view in browser to view that assembly in the genome browser.

See also: assembly statisticstrack statistics <== additional information for these assemblies.


Cite reference: To reference these resources in publications, please credit:

Clawson, H., Lee, B.T., Raney, B.J. et al. "GenArk: towards a million UCSC genome browsers.
Genome Biol 24, 217 (2023). https://doi.org/10.1186/s13059-023-03057-x

Data resource links

NOTE: Click on the column headers to sort the table by that column

The common name and view in browser will attach only that single assembly to the genome browser.
The scientific name and data download link provides access to the files for that one assembly hub.
The other links provide access to NCBI resources for these assemblies.
count common name and
view in UCSC browser
[IGV browser]
scientific name
and data download
NCBI assembly BioSample BioProject assembly date,
source link
1 Abingdon island giant tortoise (Lonesome George 2018)[IGV] Chelonoidis abingdonii GCF_003597395.1_ASM359739v1 SAMN07840320 PRJNA416050 2018-09-25
2 Abingdon island giant tortoise (Lonesome George 2025)[IGV] Chelonoidis abingdonii GCF_003597395.2_CheloAbing_2.0 SAMN07840320 PRJNA416050 2025-04-29
3 adder (hap1 2024)[IGV] Vipera berus GCA_964194415.1_rVipBer3.hap1.1 SAMEA114293681 PRJEB76966 2024-06-28
4 adder (hap1.1 2024)[IGV] Vipera berus GCF_964194415.1_rVipBer3.hap1.1 SAMEA114293681 PRJEB76966 2024-06-28
5 adder (hap2 2024)[IGV] Vipera berus GCA_964194405.1_rVipBer3.hap2.1 SAMEA114293681 PRJEB76965 2024-06-27
6 Aegean wall lizard (hap1.1 2024)[IGV] Podarcis erhardii GCF_964252035.1_rPodErh1.hap1.1 SAMEA115336771 PRJEB79339 2024-08-31
7 Aeolian wall lizard (La Canna islet alternate hap 2022)[IGV] Podarcis raffonei GCA_027172095.1_rPodRaf1.alt SAMN28455423 PRJNA839508 2022-12-21
8 Aeolian wall lizard (La Canna islet primary hap 2022 refseq)[IGV] Podarcis raffonei GCF_027172205.1_rPodRaf1.pri SAMN28455423 PRJNA839511 2022-12-27
9 African bullfrog (1538 2019)[IGV] Pyxicephalus adspersus GCA_004786255.1_Pads_1.0 SAMN08767028 PRJNA439445 2019-04-17
10 African bullfrog (2023)[IGV] Pyxicephalus adspersus GCF_032062135.1_UCB_Pads_2.0 SAMN08767402 PRJNA578592 2023-09-27
11 African clawed frog (2021)[IGV] Xenopus laevis GCF_017654675.1_Xenopus_laevis_v10.1 SAMN18035302 PRJNA313213 2021-04-12
12 American alligator (2023 refseq)[IGV] Alligator mississippiensis GCF_030867095.1_rAllMis1 SAMN37045233 PRJNA1006701 2023-08-24
13 American alligator (hap1 2026)[IGV] Alligator mississippiensis GCA_057657785.1_rAllMis2.hap1 SAMN56400128 PRJNA1434417 2026-05-15
14 American alligator (hap2 2026)[IGV] Alligator mississippiensis GCA_057657805.1_rAllMis2.hap2 SAMN56400128 PRJNA1434418 2026-05-15
15 American alligator (KSC_2009_1 2016)[IGV] Alligator mississippiensis GCF_000281125.3_ASM28112v4 SAMN02981418 PRJNA159843 2016-03-28
16 American bullfrog (2022-GZ 2024)[IGV] Aquarana catesbeiana GCF_042186555.1_ASM4218655v1 SAMN37430746 PRJNA1018279 2024-09-24
17 American bullfrog (primary hap 2024)[IGV] Aquarana catesbeiana GCA_037953035.1_aLitCat1_p1.0 SAMN39710067 PRJNA1077975 2024-04-04
18 American eel (EN2019 2024)[IGV] Anguilla rostrata GCF_018555375.3_ASM1855537v3 SAMN18538529 PRJNA718538 2024-03-04
19 Andalusian wall lizard (hap1.1 2025)[IGV] Podarcis vaucheri GCF_965113315.1_rPodVau1.hap1.1 SAMEA115336770 PRJEB85075 2025-01-24
20 angelshark (IRGN 9GIWDBWNYT 2023)[IGV] Squatina squatina GCA_031763465.1_ASM3176346v1 SAMN33059334 PRJNA931335 2023-09-20
21 Arctic lamprey (IMCB_JLM_01 2021)[IGV] Lethenteron camtschaticum GCA_018977245.1_IMCB_Ljap_1.0 SAMN02981514 PRJNA575627 2021-06-21
22 Asian vine snake (Xishuangbanna 2023)[IGV] Ahaetulla prasina GCF_028640845.1_ASM2864084v1 SAMN32882022 PRJNA926696 2023-02-22
23 Asiatic toad (SCDJY-AF-19 2020)[IGV] Bufo gargarizans GCF_014858855.1_ASM1485885v1 SAMN14734018 PRJNA628553 2020-10-21
24 Atlantic hagfish (alternate hap 2024)[IGV] Myxine glutinosa GCA_964187825.1_kmMyxGlut1.1_alternate_haplotype SAMEA12790223 PRJEB76629 2024-06-19
25 Atlantic hagfish (MG_SS 2024)[IGV] Myxine glutinosa GCF_040869285.1_UKY_Mglu_1.0 SAMN41069696 PRJNA1104135 2024-07-30
26 Atlantic hagfish (primary hap 2024)[IGV] Myxine glutinosa GCA_964187855.1_kmMyxGlut1.1 SAMEA12790223 PRJEB76628 2024-06-18
27 Atlantic ridley (rLepKem1 hap1 2025)[IGV] Lepidochelys kempii GCA_965140285.1_rLepKem1.hap1 SAMN46282779 PRJNA1211703 2025-03-26
28 Atlantic ridley (rLepKem1 hap2 2025 refseq)[IGV] Lepidochelys kempii GCF_965140265.1_rLepKem1.hap2 SAMN46282779 PRJNA1211704 2025-03-26
29 Atlantic stingray (hap1 2023 refseq)[IGV] Hypanus sabinus GCF_030144855.1_sHypSab1.hap1 SAMN32745077 PRJNA924072 2023-06-05
30 Atlantic stingray (hap2 2023)[IGV] Hypanus sabinus GCA_030144785.1_sHypSab1.hap2 SAMN32745077 PRJNA924071 2023-06-05
31 Australian saltwater crocodile[IGV] Crocodylus porosus GCF_001723895.1_CroPor_comp1 SAMN03102602 PRJNA163131 2016-09-13
32 axolotl (DD151 2021)[IGV] Ambystoma mexicanum GCA_002915635.3_AmbMex60DD SAMN06554622 PRJNA378970 2021-04-01
33 axolotl (Mex_15411 2024 refseq)[IGV] Ambystoma mexicanum GCF_040938575.1_UKY_AmexF1_1 SAMN43142723 PRJNA1104202 2024-07-30
34 barred grass snake (hap1.1 2024)[IGV] Natrix helvetica GCF_964273705.1_rNatHel1.hap1.1 SAMEA114598156 PRJEB80796 2024-10-05
35 basking shark (hap1.1 2024)[IGV] Cetorhinus maximus GCF_964194155.1_sCetMax3.hap1.1 SAMEA113902670 PRJEB76905 2024-06-28
36 basking shark (sCetMax3.hap1.1 2024)[IGV] Cetorhinus maximus GCA_964194155.1_sCetMax3.hap1.1 SAMEA113902670 PRJEB76905 2024-06-28
37 basking shark (sCetMax3.hap2.1 2024)[IGV] Cetorhinus maximus GCA_964194165.1_sCetMax3.hap2.1 SAMEA113902670 PRJEB76904 2024-06-27
38 Bellinger river turtle (v2 BRST_UC0152H_USYD 2025)[IGV] Myuchelys georgesi GCA_040894355.2_rMyuGeo1.pri SAMN36918804 PRJNA1003540 2025-02-06
39 beluga (Lower Danube River Hh-F2 2024)[IGV] Huso huso GCA_036884735.1_HHUS_1.1 SAMN18137463 PRJNA706526 2024-03-01
40 Blainville's horned lizard (alternate hap 2022)[IGV] Phrynosoma blainvillii GCA_026167975.1_rPhrBla1.0.hap2 SAMN29046554 PRJNA873121 2022-11-14
41 Blainville's horned lizard (primary hap 2022)[IGV] Phrynosoma blainvillii GCA_026167985.1_rPhrBla1.0.hap1 SAMN29046554 PRJNA873122 2022-11-14
42 blonde ray (alternate hap 2023)[IGV] Raja brachyura GCA_963513955.1_sRajBra1.1_alternate_haplotype SAMEA110450105 PRJEB66373 2023-09-28
43 blonde ray (primary hap 2023)[IGV] Raja brachyura GCA_963514005.1_sRajBra1.1 SAMEA110450105 PRJEB66374 2023-09-28
44 blonde ray (primary hap 2023)[IGV] Raja brachyura GCF_963514005.1_sRajBra1.1 SAMEA110450105 PRJEB66374 2023-09-28
45 Bocage's wall lizard (hap1.1 2024)[IGV] Podarcis bocagei GCF_964188305.1_rPodBoc1.hap1.1 SAMEA115336769 PRJEB76738 2024-06-21
46 brilliant-thighed poison frog (Ecuador 8001 2023)[IGV] Allobates femoralis GCA_033576535.1_ASM3357653v1 SAMN32316868 PRJNA913987 2023-11-13
47 brown anole (Geneva1000 2022 refseq)[IGV] Anolis sagrei ordinatus GCF_025583915.1_AnoSag2.1 SAMN29589363 PRJNA783271 2022-10-05
48 brown anole (maternal hap 2024 genbank)[IGV] Anolis sagrei GCA_037176765.1_rAnoSag1.mat SAMN40144551 PRJNA1080665 2024-03-15
49 brown anole (maternal hap 2024 refseq)[IGV] Anolis sagrei GCF_037176765.1_rAnoSag1.mat SAMN40144551 PRJNA1080665 2024-03-15
50 brown anole (rAnoSag1 2024)[IGV] Anolis sagrei GCA_037176775.1_rAnoSag1.pat SAMN40144551 PRJNA1080664 2024-03-15
51 brown hagfish (PATA_SCHIZ_1 2024)[IGV] Eptatretus atami GCA_035128595.1_Eptata_v1 SAMN34122694 PRJNA953751 2024-01-09
52 brown house snake (FMNH 251328 2023)[IGV] Boaedon fuliginosus GCA_027560395.1_ASM2756039v1 SAMN24183403 PRJNA790025 2023-01-03
53 brown spotted pit viper[IGV] Protobothrops mucrosquamatus GCF_001527695.2_P.Mucros_1.0 SAMD00043515 PRJDB4386 2016-01-22
54 brownbanded bambooshark (Juve2018m 2025)[IGV] Chiloscyllium punctatum GCF_047496795.1_sChiPun1.3 SAMN45949008 PRJNA1202043 2025-02-07
55 Burmese python[IGV] Python bivittatus GCF_000186305.1_Python_molurus_bivittatus-5.0.2 SAMN02981298 PRJNA61243 2013-09-15
56 California glossy snake (A.elegans occidentalis HBS 135684 alternate hap 2022)[IGV] Arizona elegans GCA_022578425.1_rAriEle1.0.a SAMN24818160 PRJNA796780 2022-03-15
57 California glossy snake (A.elegans occidentalis HBS 135684 primary hap 2022)[IGV] Arizona elegans GCA_022577455.1_rAriEle1.0.p SAMN24818160 PRJNA796781 2022-03-15
58 Cape dwarf chameleon (Western Cape Province JTBG20231 hap1 2025)[IGV] Bradypodion pumilum GCA_047715975.2_rBraPum1.hap1 SAMN35825189 PRJNA1172112 2025-12-17
59 Cape dwarf chameleon (Western Cape Province JTBG20231 hap2 2025)[IGV] Bradypodion pumilum GCA_047715955.2_rBraPum1.hap2 SAMN35825189 PRJNA1172113 2025-12-17
60 Caribbean electric ray (hap1 2024 refseq)[IGV] Narcine bancroftii GCF_036971445.1_sNarBan1.hap1 SAMN39325148 PRJNA1063320 2024-03-06
61 Caribbean electric ray (hap2 2024)[IGV] Narcine bancroftii GCA_036971175.1_sNarBan1.hap2 SAMN39325148 PRJNA1063321 2024-03-06
62 Catalonian wall lizard (hap1.1 2025)[IGV] Podarcis liolepis GCF_965112155.1_rPodLio1.hap1.1 SAMEA114217798 PRJEB84044 2025-01-23
63 central bearded dragon (2017)[IGV] Pogona vitticeps GCF_900067755.1_pvi1.1 SAMEA2300447 PRJEB5206 2017-02-28
64 central bearded dragon (2025)[IGV] Pogona vitticeps GCF_047335585.1_Pvi2.1 SAMN44670087 PRJNA1184386 2025-01-31
65 central bearded dragon (Pit_001003342236 2025)[IGV] Pogona vitticeps GCA_051106095.1_PviZW2.1 SAMN48046406 PRJNA1252275 2025-06-26
66 Chinese alligator[IGV] Alligator sinensis GCF_000455745.1_ASM45574v1 SAMN02981559 PRJNA215016 2013-08-29
67 Chinese crocodile lizard (Guangxi GXDGS128 2021)[IGV] Shinisaurus crocodilurus GCA_021292165.1_IOZ_Scro_1.0 SAMN19072228 PRJNA726336 2021-12-28
68 Chinese soft-shelled turtle (Daiwa-1 2012)[IGV] Pelodiscus sinensis GCF_000230535.1_PelSin_1.0 SAMN02981371 PRJNA68233 2012-07-24
69 Chinese soft-shelled turtle (JC-2024 2025)[IGV] Pelodiscus sinensis GCF_049634645.1_ASM4963464v1 SAMN43264949 PRJNA1149904 2025-04-15
70 cloudy catshark (Kashiwa2021f 2025)[IGV] Scyliorhinus torazame GCF_047496885.1_sScyTor2.1 SAMN45957921 PRJNA1202043 2025-02-07
71 coelacanth[IGV] Latimeria chalumnae GCF_000225785.1_LatCha1 SAMN00138723 PRJNA56111 2011-09-12
72 coelacanth (alternate hap 2024)[IGV] Latimeria chalumnae GCA_037215105.1_fLatCha1.alt SAMN39710040 PRJNA1072168 2024-03-15
73 coelacanth (fLatCha1 primary hap 2024)[IGV] Latimeria chalumnae GCF_037176945.1_fLatCha1.pri SAMN39710040 PRJNA1072167 2024-03-18
74 coelacanth (primary hap 2024)[IGV] Latimeria chalumnae GCA_037176945.1_fLatCha1.pri SAMN39710040 PRJNA1072167 2024-03-18
75 Columbretes wall lizard (hap1.1 2025)[IGV] Podarcis liolepis GCA_965112155.1_rPodLio1.hap1.1 SAMEA114217798 PRJEB84044 2025-01-23
76 Columbretes wall lizard (hap2.1 2025)[IGV] Podarcis liolepis GCA_965178375.1_rPodLio1.hap2.1 SAMEA114217798 PRJEB86247 2025-03-05
77 common blue-tongued skink (hap1 2024)[IGV] Tiliqua scincoides GCA_035046495.1_rTilSci1.hap1 SAMN37319749 PRJNA1014189 2024-01-04
78 common blue-tongued skink (hap2 2024)[IGV] Tiliqua scincoides GCA_035046505.1_rTilSci1.hap2 SAMN37319749 PRJNA1014188 2024-01-04
79 common frog (alternate hap 2021)[IGV] Rana temporaria GCA_905171725.1_aRanTem1.1_alternate_haplotype SAMEA7521635 PRJEB42170 2021-01-28
80 common garter snake[IGV] Thamnophis sirtalis GCF_001077635.1_Thamnophis_sirtalis-6.0 SAMN03759628 PRJNA189551 2015-06-26
81 common lizard (primary hap 2023)[IGV] Zootoca vivipara GCA_963506605.1_rZooViv1.1 SAMEA111528662 PRJEB66180 2023-09-20
82 common lizard Z.vivipara (hap1.1 2025)[IGV] Zootoca vivipara GCA_965207765.1_rZooViv2.hap1.1 SAMEA111528663 PRJEB86928 2025-03-15
83 common lizard Z.vivipara (hap2.1 2025)[IGV] Zootoca vivipara GCA_965208345.1_rZooViv2.hap2.1 SAMEA111528663 PRJEB86929 2025-03-15
84 common lizard Z.vivipara (primary hap 2023)[IGV] Zootoca vivipara GCF_963506605.1_rZooViv1.1 SAMEA111528662 PRJEB66180 2023-09-20
85 common newt (alternate hap 2024)[IGV] Lissotriton vulgaris GCA_964261385.1_aLisVul1.1_alternate_haplotype SAMEA110240861 PRJEB79653 2024-09-08
86 common newt (primary hap 2024)[IGV] Lissotriton vulgaris GCA_964263255.1_aLisVul1.1 SAMEA110240861 PRJEB79654 2024-10-17
87 common spadefoot toad (primary hap 2024 genbank)[IGV] Pelobates fuscus GCA_036172605.1_aPelFus1.pri SAMN39244120 PRJNA1060730 2024-01-26
88 common spadefoot toad (primary hap 2024 refseq)[IGV] Pelobates fuscus GCF_036172605.1_aPelFus1.pri SAMN39244120 PRJNA1060730 2024-01-26
89 common toad (alternate hap 2021)[IGV] Bufo bufo GCA_905171715.1_aBufBuf1.1_alternate_haplotype SAMEA7521636 PRJEB42169 2021-01-28
90 common toad (primary hap 2021)[IGV] Bufo bufo GCF_905171765.1_aBufBuf1.1 SAMEA7521636 PRJEB42168 2021-01-28
91 common wall lizard (hap1 2024 genbank)[IGV] Podarcis muralis GCA_964188315.1_rPodMur119.hap1.1 SAMEA115336776 PRJEB76737 2024-06-21
92 common wall lizard (hap1 2024 refseq)[IGV] Podarcis muralis GCF_964188315.1_rPodMur119.hap1.1 SAMEA115336776 PRJEB76737 2024-06-21
93 common wall lizard (hap2 2024)[IGV] Podarcis muralis GCA_964188365.1_rPodMur119.hap2.1 SAMEA115336776 PRJEB76736 2024-06-19
94 common wall lizard (yellow 2019)[IGV] Podarcis muralis GCF_004329235.1_PodMur_1.0 SAMN10820182 PRJNA515813 2019-03-07
95 corn snake (Columbia U 2023)[IGV] Pantherophis guttatus GCF_029531705.1_CU_Pguttatus_1 SAMN25637154 PRJNA803176 2023-03-31
96 corn snake (EG266 2020)[IGV] Pantherophis guttatus GCF_001185365.1_UNIGE_PanGut_3.0 SAMN12106767 PRJNA268069 2020-04-13
97 corroboree frog (hap1 2023)[IGV] Pseudophryne corroboree GCA_028390055.1_aPseCor3.hap1 SAMN32631236 PRJNA921727 2023-02-01
98 corroboree frog (hap2 2023 refseq)[IGV] Pseudophryne corroboree GCF_028390025.1_aPseCor3.hap2 SAMN32631236 PRJNA921726 2023-02-06
99 crested gecko (US Hobby MAA-2024a 2024)[IGV] Correlophus ciliatus GCA_040207535.1_USC_Ccil_1.0 SAMN40604022 PRJNA1091669 2024-06-17
100 Cretan wall lizard (alternate hap 2023)[IGV] Podarcis cretensis GCA_951804955.1_rPodCre2.1_alternate_haplotype SAMEA12110019 PRJEB62766 2023-06-02
101 Cretan wall lizard (primary hap 2023)[IGV] Podarcis cretensis GCA_951804945.1_rPodCre2.1 SAMEA12110019 PRJEB62765 2023-06-02
102 Cretan wall lizard (primary hap 2023)[IGV] Podarcis cretensis GCF_951804945.1_rPodCre2.1 SAMEA12110019 PRJEB62765 2023-06-02
103 cuckoo ray (2025)[IGV] Leucoraja naevus GCA_965643135.1_sLeuNae2.1 SAMEA118656754 PRJEB90305 2025-07-19
104 Dalmatian wall lizard (hap1.1 2024)[IGV] Podarcis melisellensis GCF_964234715.1_rPodMel1.hap1.1 SAMEA115336775 PRJEB79071 2024-08-31
105 Darwin's frog (hap1 2025)[IGV] Rhinoderma darwinii GCF_050947455.1_aRhiDar2.hap1 SAMN48528154 PRJNA1263552 2025-06-17
106 Darwin's frog (hap2 2025)[IGV] Rhinoderma darwinii GCA_050947465.1_aRhiDar2.hap2 SAMN48528154 PRJNA1263553 2025-06-17
107 diablito poison frog (Paru LO004 2023)[IGV] Oophaga sylvatica GCA_033576555.1_ASM3357655v1 SAMN33211990 PRJNA909817 2023-11-13
108 diamondback terrapin (hap1 2023 refseq)[IGV] Malaclemys terrapin pileata GCF_027887155.1_rMalTer1.hap1 SAMN31394215 PRJNA895896 2023-01-18
109 diamondback terrapin (hap2 rMalTer1 2023)[IGV] Malaclemys terrapin pileata GCA_027887205.1_rMalTer1.hap2 SAMN31394215 PRJNA895897 2023-01-18
110 dyeing poison frog (UK_male_01 2024 genbank)[IGV] Dendrobates tinctorius GCA_039654945.1_ASM3965494v1 SAMN38117364 PRJNA977854 2024-05-16
111 dyeing poison frog (UK_male_01 2024 refseq)[IGV] Dendrobates tinctorius GCF_039654945.1_ASM3965494v1 SAMN38117364 PRJNA977854 2024-05-16
112 eastern brown snake[IGV] Pseudonaja textilis GCF_900518735.1_EBS10Xv2-PRI SAMEA4800208 PRJEB27869 2018-09-24
113 Eastern musk turtle (MuskTurtle02 primary hap 2026)[IGV] Sternotherus odoratus GCA_032164245.2_rSteOdo2_p1.1 SAMN36942441 PRJNA1016400 2026-05-05
114 eastern musk turtle (primary hap 2023)[IGV] Sternotherus odoratus GCA_032164245.1_rSteOdo2_p1.0 SAMN36942441 PRJNA1016400 2023-09-29
115 eastern narrow-mouthed toad (hap2 2023)[IGV] Gastrophryne carolinensis GCA_027917415.1_aGasCar1.hap2 SAMN31805274 PRJNA916749 2023-01-18
116 eastern narrow-mouthed toad (primary haplotype 2023)[IGV] Gastrophryne carolinensis GCA_027917425.1_aGasCar1.pri SAMN31805274 PRJNA916748 2023-01-18
117 elephant shark (2021)[IGV] Callorhinchus milii GCF_018977255.1_IMCB_Cmil_1.0 SAMN12905446 PRJNA575613 2021-06-21
118 elongated tortoise (hap1 2025)[IGV] Indotestudo elongata GCA_050000095.2_rIndElo1.hap1 SAMN47882486 PRJNA1249185 2025-08-19
119 elongated tortoise (hap2 2025)[IGV] Indotestudo elongata GCA_050000115.1_rIndElo1.hap2 SAMN47882486 PRJNA1249186 2025-04-29
120 epaulette shark (alternate hap sHemOce1 2021)[IGV] Hemiscyllium ocellatum GCA_020745765.1_sHemOce1.mat.decon SAMN22550098 PRJNA774309 2021-11-05
121 epaulette shark (primary hap 2021 refseq)[IGV] Hemiscyllium ocellatum GCF_020745735.1_sHemOce1.pat.X.cur. SAMN22550098 PRJNA774310 2021-11-05
122 European common frog (2021)[IGV] Rana temporaria GCF_905171775.1_aRanTem1.1 SAMEA7521635 PRJEB42171 2021-01-28
123 European conger (alternate hap 2023)[IGV] Conger conger GCA_963514125.1_fConCon1.1_alternate_haplotype SAMEA12219431 PRJEB66427 2023-09-29
124 European eel (alternate hap 2020)[IGV] Anguilla anguilla GCA_013347865.1_fAngAng1.alt SAMN12623627 PRJNA561984 2020-06-12
125 European eel (primary hap 2020 refseq)[IGV] Anguilla anguilla GCF_013347855.1_fAngAng1.pri SAMN12623627 PRJNA561979 2020-06-18
126 European leaf-toed gecko (hap1 2023)[IGV] Euleptes europaea GCF_029931775.1_rEulEur1.hap1 SAMN32622440 PRJNA919166 2023-05-15
127 European leaf-toed gecko (hap2 2023)[IGV] Euleptes europaea GCA_029931755.1_rEulEur1.hap2 SAMN32622440 PRJNA919167 2023-05-03
128 European pond turtle (hap1 2023 genbank)[IGV] Emys orbicularis GCA_028017835.1_rEmyOrb1.hap1 SAMN31805221 PRJNA919152 2023-01-30
129 European pond turtle (hap1 2023 refseq)[IGV] Emys orbicularis GCF_028017835.1_rEmyOrb1.hap1 SAMN31805221 PRJNA919152 2023-01-30
130 European pond turtle (hap2 rEmyOrb1 2023)[IGV] Emys orbicularis GCA_028017845.1_rEmyOrb1.hap2 SAMN31805221 PRJNA919101 2023-01-26
131 European river lamprey (alternate hap 2024)[IGV] Lampetra fluviatilis GCA_964198585.1_kcLamFluv1.1_alternate_haplotype SAMEA111528664 PRJEB77460 2024-07-12
132 European river lamprey (primary hap 2024)[IGV] Lampetra fluviatilis GCA_964198595.1_kcLamFluv1.1 SAMEA111528664 PRJEB77461 2024-07-13
133 European river lamprey (primary hap 2024)[IGV] Lampetra fluviatilis GCF_964198595.1_kcLamFluv1.1 SAMEA111528664 PRJEB77461 2024-07-13
134 Far Eastern brook lamprey (LAM-NWPU_2019-01 2020)[IGV] Lethenteron reissneri GCF_015708825.1_ASM1570882v1 SAMN12436412 PRJNA558325 2020-12-01
135 fence lizard[IGV] Sceloporus undulatus GCF_019175285.1_SceUnd_v1.1 SAMN14373011 PRJNA612440 2021-07-08
136 Filfola wall lizard (hap1.1 2024)[IGV] Podarcis filfolensis GCF_964270895.1_rPodFil1.hap1.1 SAMEA113403362 PRJEB80628 2024-09-29
137 Filfola wall lizard (rPodFil1.hap1.1 2024)[IGV] Podarcis filfolensis GCA_964270895.1_rPodFil1.hap1.1 SAMEA113403362 PRJEB80628 2024-09-29
138 Filfola wall lizard (rPodFil1.hap2.1 2024)[IGV] Podarcis filfolensis GCA_964270875.1_rPodFil1.hap2.1 SAMEA113403362 PRJEB80629 2024-09-30
139 fire-bellied toad (alternate hap 2023)[IGV] Bombina bombina GCA_027579415.1_aBomBom1.alt SAMN32378350 PRJNA915413 2023-01-06
140 fire-bellied toad (primary hap 2023 refseq)[IGV] Bombina bombina GCF_027579735.1_aBomBom1.pri SAMN32378350 PRJNA915412 2023-01-09
141 flatback sea turtle (hap1 2025 refseq)[IGV] Natator depressus GCF_965152275.1_rNatDep2.hap1 SAMN46282745 PRJNA1211699 2025-02-16
142 flatback sea turtle (hap2 2025)[IGV] Natator depressus GCA_965152195.1_rNatDep2.hap2 SAMN46282745 PRJNA1211700 2025-02-16
143 Fleay's barred frog (hap1 2024 genbank)[IGV] Mixophyes fleayi GCA_038048845.1_aMixFle1.hap1 SAMN39657083 PRJNA1071269 2024-04-17
144 Fleay's barred frog (hap1 2024 refseq)[IGV] Mixophyes fleayi GCF_038048845.1_aMixFle1.hap1 SAMN39657083 PRJNA1071269 2024-04-17
145 Fleay's barred frog (hap2 2024)[IGV] Mixophyes fleayi GCA_038048865.1_aMixFle1.hap2 SAMN39657083 PRJNA1071268 2024-04-17
146 Florida worm lizard (hap1 rRhiFlo1 2023)[IGV] Rhineura floridana GCA_030035715.1_rRhiFlo1.hap1 SAMN34105704 PRJNA953089 2023-05-16
147 Florida worm lizard (hap2 2023 genbank)[IGV] Rhineura floridana GCA_030035675.1_rRhiFlo1.hap2 SAMN34105704 PRJNA953090 2023-05-22
148 Florida worm lizard (hap2 2023 refseq)[IGV] Rhineura floridana GCF_030035675.1_rRhiFlo1.hap2 SAMN34105704 PRJNA953090 2023-05-22
149 frog A.baeobatrachus (hap1 2025 genbank)[IGV] Anomaloglossus baeobatrachus GCA_048569485.1_aAnoBae1.hap1 SAMN46966667 PRJNA1226914 2025-03-13
150 frog A.baeobatrachus (hap1 2025 refseq)[IGV] Anomaloglossus baeobatrachus GCF_048569485.1_aAnoBae1.hap1 SAMN46966667 PRJNA1226914 2025-03-13
151 frog A.baeobatrachus (hap2 2025)[IGV] Anomaloglossus baeobatrachus GCA_048569465.1_aAnoBae1.hap2 SAMN46966667 PRJNA1226913 2025-03-13
152 Gaboon caecilian (alternate hap 2019)[IGV] Geotrypetes seraphini GCA_902459495.1_aGeoSer1.1_alternate_haplotype SAMEA104387963 PRJEB33991 2019-08-18
153 Gaboon caecilian (primary hap 2021)[IGV] Geotrypetes seraphini GCF_902459505.2_aGeoSer1.2 SAMEA104387963 PRJEB33992 2021-04-24
154 Gaboon caecilian (v1.2 2021 genbank)[IGV] Geotrypetes seraphini GCA_902459505.2_aGeoSer1.2 SAMEA104387963 PRJEB33992 2021-04-24
155 gharial (Ggan-Ray 2016)[IGV] Gavialis gangeticus GCF_001723915.1_GavGan_comp1 SAMN03102901 PRJNA172383 2016-09-13
156 gharial (hap1 2023)[IGV] Gavialis gangeticus GCA_030020385.1_rGavGan2.hap1 SAMN34116453 PRJNA953441 2023-05-16
157 gharial (hap2 2023)[IGV] Gavialis gangeticus GCA_030020295.1_rGavGan2.hap2 SAMN34116453 PRJNA953442 2023-05-22
158 giant manta (hap1 2023 refseq)[IGV] Mobula birostris GCF_030028105.1_sMobBir1.hap1 SAMN32746370 PRJNA924117 2023-05-22
159 giant manta (hap2 2023)[IGV] Mobula birostris GCA_030035685.1_sMobBir1.hap2 SAMN32746370 PRJNA924118 2023-05-22
160 giant South American river turtle (hap1 2024)[IGV] Podocnemis expansa GCA_045364785.1_rPodExp1_haplotype_1 SAMN44516642 PRJNA1180207 2024-12-02
161 giant South American river turtle (hap2 2024)[IGV] Podocnemis expansa GCA_045364815.1_rPodExp1_haplotype_2 SAMN44516642 PRJNA1180209 2024-12-02
162 golden mantella (hap1 2025)[IGV] Mantella aurantiaca GCA_048565345.1_aManAur1.hap1 SAMN46714743 PRJNA1220198 2025-03-12
163 golden mantella (hap2 2025)[IGV] Mantella aurantiaca GCA_048565335.1_aManAur1.hap2 SAMN46714743 PRJNA1220199 2025-03-12
164 golden poison dart frog (yellow primary hap 2024)[IGV] Phyllobates terribilis GCF_046119375.1_ASM4611937v1 SAMN39842184 PRJNA1073876 2024-12-17
165 goldspotted eel (2025)[IGV] Myrichthys ocellatus GCA_975146105.1_fMyrOce1.1 SAMEA118798364 PRJEB90897 2025-10-09
166 Goodes thornscrub tortoise (Sinaloan 2019)[IGV] Gopherus evgoodei GCF_007399415.2_rGopEvg1_v1.p SAMN03496275 PRJNA489103 2019-07-25
167 Goodes thornscrub tortoise (Sinaloan alternate hap 2019)[IGV] Gopherus evgoodei GCA_007399395.1_rGopEvg1_v1.alt SAMN03496275 PRJNA489104 2019-07-24
168 gopher snake (HBS135680 alternate hap 2023 refseq)[IGV] Pituophis catenifer annectens GCF_029215685.1_rPitCat1.0.hap2 SAMN33386007 PRJNA937313 2023-03-14
169 gopher snake (HBS135680 primary hap 2023)[IGV] Pituophis catenifer annectens GCA_029215655.1_rPitCat1.0.hap1 SAMN33386007 PRJNA937314 2023-03-14
170 graceful crag lizard (Gifberg primary hap 2022)[IGV] Hemicordylus capensis GCF_027244095.1_rHemCap1.1.pri SAMN31669488 PRJNA899811 2022-12-28
171 Grand Cayman blue iguana (hap1 2023)[IGV] Cyclura pinguis GCA_030412105.1_rCycPin1.hap1 SAMN35151422 PRJNA973807 2023-07-07
172 Grand Cayman blue iguana (hap2 2023)[IGV] Cyclura pinguis GCA_030412085.1_rCycPin1.hap2 SAMN35151422 PRJNA973804 2023-07-05
173 gray bichir[IGV] Polypterus senegalus GCF_016835505.1_ASM1683550v1 SAMN13737739 PRJNA599026 2021-02-09
174 great white shark (alternate hap 2021)[IGV] Carcharodon carcharias GCA_017639455.1_sCarCar2.alt SAMN12629504 PRJNA562008 2021-03-30
175 great white shark (primary hap 2021)[IGV] Carcharodon carcharias GCA_017639515.1_sCarCar2.pri SAMN12629504 PRJNA562007 2021-03-30
176 great white shark (primary hap 2021)[IGV] Carcharodon carcharias GCF_017639515.1_sCarCar2.pri SAMN12629504 PRJNA562007 2021-03-30
177 green anole (JA03-04 2024)[IGV] Anolis carolinensis GCF_035594765.1_rAnoCar3.1.pri SAMN37993897 PRJNA1032920 2024-01-12
178 green anole (v1 2011)[IGV] Anolis carolinensis GCF_000090745.1_AnoCar2.0 SAMN02981230 PRJNA18787 2011-01-10
179 green anole (v2 2010)[IGV] Anolis carolinensis GCF_000090745.2_AnoCar2.0 SAMN02981230 PRJNA18787 2010-05-17
180 green sea turtle (primary hap 2021)[IGV] Chelonia mydas GCA_015237465.2_rCheMyd1.pri.v2 SAMN12612360 PRJNA561941 2021-07-15
181 green sea turtle (v2 alternate hap 2021)[IGV] Chelonia mydas GCA_015220195.2_rCheMyd1.alt.v2 SAMN12612360 PRJNA561942 2021-07-15
182 green sea turtle (v2 primary hap 2021)[IGV] Chelonia mydas GCF_015237465.2_rCheMyd1.pri.v2 SAMN12612360 PRJNA561941 2021-07-15
183 Greenland sleeper shark (GS21.2 2025)[IGV] Somniosus microcephalus GCA_052327205.1_FLI_Smic_1.0 SAMN47384478 PRJNA1236315 2025-08-27
184 grey reef shark (2025)[IGV] Carcharhinus amblyrhynchos GCA_965295155.1_sCarAmb.v2.hapB SAMEA118362357 PRJEB89872 2025-10-10
185 hawksbill sea turtle (B2_1 2023)[IGV] Eretmochelys imbricata GCA_030012505.1_ASM3001250v1 SAMN30552102 PRJNA872952 2023-05-15
186 hawksbill sea turtle (hap1 2025 genbank)[IGV] Eretmochelys imbricata GCA_965152235.1_rEreImb1.hap1 SAMN46283036 PRJNA1211707 2025-04-10
187 hawksbill sea turtle (hap1 2025 refseq)[IGV] Eretmochelys imbricata GCF_965152235.1_rEreImb1.hap1 SAMN46283036 PRJNA1211707 2025-04-10
188 hawksbill sea turtle (hap2 2025)[IGV] Eretmochelys imbricata GCA_965152285.1_rEreImb1.hap2 SAMN46283036 PRJNA1211708 2025-02-16
189 High Himalaya frog[IGV] Nanorana parkeri GCF_000935625.1_ASM93562v1 SAMN02720813 PRJNA243398 2015-03-17
190 horn shark (hap1 2024)[IGV] Heterodontus francisci GCA_036365525.1_sHetFra1.hap1 SAMN39432692 PRJNA1064416 2024-02-06
191 horn shark (hap2 2024)[IGV] Heterodontus francisci GCA_036365495.1_sHetFra1.hap2 SAMN39432692 PRJNA1064417 2024-02-06
192 horn shark (sHetFra1hap1 2024)[IGV] Heterodontus francisci GCF_036365525.1_sHetFra1.hap1 SAMN39432692 PRJNA1064416 2024-02-06
193 hourglass treefrog (maternal 2023 genbank)[IGV] Dendropsophus ebraccatus GCA_027789725.1_aDenEbr1.mat SAMN32145295 PRJNA910818 2023-01-13
194 hourglass treefrog (paternal 2023 refseq)[IGV] Dendropsophus ebraccatus GCF_027789765.1_aDenEbr1.pat SAMN32145295 PRJNA910819 2023-01-13
195 Hungarian meadow viper (primary hap 2022)[IGV] Vipera ursinii GCF_947247035.1_rVipUrs1.1 SAMEA12832258 PRJEB57183 2022-10-30
196 Iberian parsley frog (aPelIbe1 2024)[IGV] Pelodytes ibericus GCA_036172795.1_aPelIbe1.pri SAMN37110875 PRJNA1008780 2024-01-26
197 Iberian ribbed newt (20211129_DDA 2022 genbank)[IGV] Pleurodeles waltl GCA_026652325.1_ASM2665232v1 SAMN28911188 PRJNA847026 2022-12-05
198 Iberian ribbed newt (hap1 20211129_DDA 2024 refseq)[IGV] Pleurodeles waltl GCF_031143425.1_aPleWal1.hap1.20221129 SAMN28911188 PRJNA990737 2024-03-19
199 Indian cobra (NN01 2019)[IGV] Naja naja GCA_009733165.1_Nana_v5 SAMN11155092 PRJNA527614 2019-12-11
200 Indian roofed turtle (hap1 2024)[IGV] Pangshura tecta GCA_045781095.1_rPanTec1.hap1 SAMN43277916 PRJNA1150336 2024-12-06
201 Indian roofed turtle (hap2 2024)[IGV] Pangshura tecta GCA_045781085.1_rPanTec1.hap2 SAMN43277916 PRJNA1150337 2024-12-06
202 Indo-Pacific tarpon (alternate hap 2020)[IGV] Megalops cyprinoides GCA_013368575.1_fMegCyp1.alt SAMN12623619 PRJNA561968 2020-06-23
203 Indo-Pacific tarpon (primary hap 2020)[IGV] Megalops cyprinoides GCA_013368585.1_fMegCyp1.pri SAMN12623619 PRJNA561967 2020-06-23
204 inshore hagfish (2023)[IGV] Eptatretus burgeri GCA_900186335.3_Eburgeri_4.0 SAMEA104124530 PRJEB21290 2023-05-01
205 Italian wall lizard (rPodSic1.hap1.1 2024)[IGV] Podarcis siculus GCA_964188175.1_rPodSic1.hap1.1 SAMEA115336774 PRJEB76730 2024-06-21
206 Italian wall lizard (rPodSic1.hap2.1 2024)[IGV] Podarcis siculus GCA_964188395.1_rPodSic1.hap2.1 SAMEA115336774 PRJEB76731 2024-06-19
207 Japanese eel (BU-2020EF 2022)[IGV] Anguilla japonica GCA_025169545.1_ASM2516954v1 SAMN29326702 PRJNA852364 2022-09-14
208 Japanese sawshark (hap1 2024 refseq)[IGV] Pristiophorus japonicus GCF_044704955.1_sPriJap1.hap1 SAMN44116980 PRJNA1170977 2024-11-13
209 Japanese sawshark (hap2 2024)[IGV] Pristiophorus japonicus GCA_044704965.1_sPriJap1.hap2 SAMN44116980 PRJNA1170978 2024-11-13
210 Kemp's ridley sea turtle (hap1 2025)[IGV] Lepidochelys kempii GCF_965140285.1_rLepKem1.hap1 SAMN46282779 PRJNA1211703 2025-03-26
211 Kenyan clawed frog (NASCO 2022)[IGV] Xenopus borealis GCA_024363595.1_UCB_Xborealis_1 SAMN27622247 PRJNA827809 2022-07-22
212 Komodo dragon (SLA01 2019)[IGV] Varanus komodoensis GCF_004798865.1_ASM479886v1 SAMN10967258 PRJNA523222 2019-04-17
213 Lataste's viper (alternate hap 2022)[IGV] Vipera latastei GCA_024294605.1_rVipLat1.alt SAMN28408464 PRJNA838199 2022-07-16
214 Lataste's viper (primary hap 2022)[IGV] Vipera latastei GCA_024294585.1_rVipLat1.pri SAMN28408464 PRJNA838200 2022-07-20
215 leatherback sea turtle (primary hap 2021)[IGV] Dermochelys coriacea GCA_009764565.4_rDerCor1.pri.v4 SAMN12629498 PRJNA561993 2021-08-25
216 leatherback sea turtle (v2 alternate hap 2020)[IGV] Dermochelys coriacea GCA_009762595.2_rDerCor1.alt.v2 SAMN12629498 PRJNA561994 2020-12-08
217 leatherback sea turtle (v4 primary hap 2021 refseq)[IGV] Dermochelys coriacea GCF_009764565.3_rDerCor1.pri.v4 SAMN12629498 PRJNA561993 2021-08-25
218 Leopard gecko (TG4126 2023)[IGV] Eublepharis macularius GCA_028583425.1_MPM_Emac_v1.0 SAMN31016422 PRJNA884264 2023-02-10
219 leopard gecko (TG4126 2023)[IGV] Eublepharis macularius GCF_028583425.1_MPM_Emac_v1.0 SAMN31016422 PRJNA884264 2023-02-10
220 lesser devil ray (2024)[IGV] Mobula hypostoma GCF_963921235.1_sMobHyp1.1 SAMEA115045128 PRJEB71673 2024-01-06
221 Lilford's wall lizard (2023)[IGV] Podarcis lilfordi GCA_947686815.1_rPodLil1.2 SAMEA112254106 PRJEB47961 2023-08-09
222 little skate (New England 2023)[IGV] Leucoraja erinaceus GCF_028641065.1_Leri_hhj_1 SAMN23457310 PRJNA783899 2023-02-22
223 lizards A.tigris stejnegeri (HBS 135688 alternate hap 2025)[IGV] Aspidoscelis tigris stejnegeri GCA_023333555.2_rAspTig1.1.alt SAMN25872408 PRJNA810477 2025-03-05
224 lizards B.pumilum (Western Cape Province hap1 2025)[IGV] Bradypodion pumilum GCA_047715975.1_rBraPum1.hap1 SAMN35825189 PRJNA1172112 2025-02-12
225 lizards B.pumilum (Western Cape Province hap2 2025)[IGV] Bradypodion pumilum GCA_047715955.1_rBraPum1.hap2 SAMN35825189 PRJNA1172113 2025-02-12
226 lizards B.pumilum (Western Cape Province JTBG20231 2024)[IGV] Bradypodion pumilum GCA_035047305.1_BraPum1.0 SAMN35825189 PRJNA986319 2024-01-03
227 lizards D.cf. smithi (hap1 2024)[IGV] Dibamus cf. smithi GCA_046126795.1_rDibSmi1.hap1 SAMN44704469 PRJNA1190889 2024-12-13
228 lizards D.cf. smithi (hap2 2024)[IGV] Dibamus cf. smithi GCA_046126825.1_rDibSmi1.hap2 SAMN44704469 PRJNA1190890 2024-12-13
229 lizards E.multicarinata webbii (San Diego HBS135686 alternate hap 2024)[IGV] Elgaria multicarinata webbii GCA_023053675.2_rElgMul1.1.alt SAMN25872353 PRJNA810482 2024-01-04
230 lizards F.pardalis (Fpa_1 2023)[IGV] Furcifer pardalis GCA_030440675.1_ASM3044067v1 SAMN35298317 PRJNA974816 2023-07-12
231 lizards L.agilis (primary hap 2019)[IGV] Lacerta agilis GCA_009819535.1_rLacAgi1.pri SAMN12629509 PRJNA562018 2019-12-31
232 lizards P.bocagei (rPodBoc1.hap1.1 2024)[IGV] Podarcis bocagei GCA_964188305.1_rPodBoc1.hap1.1 SAMEA115336769 PRJEB76738 2024-06-21
233 lizards P.bocagei (rPodBoc1.hap2.1 2024)[IGV] Podarcis bocagei GCA_964188325.1_rPodBoc1.hap2.1 SAMEA115336769 PRJEB76739 2024-06-21
234 lizards P.erhardii (rPodErh1.hap1.1 2024)[IGV] Podarcis erhardii GCA_964252035.1_rPodErh1.hap1.1 SAMEA115336771 PRJEB79339 2024-08-31
235 lizards P.erhardii (rPodErh1.hap2.1 2024)[IGV] Podarcis erhardii GCA_964251985.1_rPodErh1.hap2.1 SAMEA115336771 PRJEB79340 2024-08-29
236 lizards P.melisellensis (rPodMel1.hap1.1 2024)[IGV] Podarcis melisellensis GCA_964234715.1_rPodMel1.hap1.1 SAMEA115336775 PRJEB79071 2024-08-31
237 lizards P.melisellensis (rPodMel1.hap2.1 2024)[IGV] Podarcis melisellensis GCA_964234825.1_rPodMel1.hap2.1 SAMEA115336775 PRJEB79072 2024-08-31
238 lizards P.pityusensis (hap1.2 2024)[IGV] Podarcis pityusensis GCF_964106645.1_rPodPit1.hap1.2 SAMEA114217797 PRJEB76014 2024-07-06
239 lizards P.pityusensis (rPodPit1.hap1.2 2024)[IGV] Podarcis pityusensis GCA_964106645.2_rPodPit1.hap1.2 SAMEA114217797 PRJEB76014 2024-07-06
240 lizards P.pityusensis (rPodPit1.hap2.2 2024)[IGV] Podarcis pityusensis GCA_964106635.2_rPodPit1.hap2.2 SAMEA114217797 PRJEB76013 2024-07-05
241 lizards P.tiliguerta (hap2.2 2025)[IGV] Podarcis tiliguerta GCA_965153305.2_rPodTil1.hap2.2 SAMEA114217799 PRJEB85969 2025-07-07
242 lizards P.vaucheri (hap1.1 2025)[IGV] Podarcis vaucheri GCA_965113315.1_rPodVau1.hap1.1 SAMEA115336770 PRJEB85075 2025-01-24
243 lizards P.vaucheri (hap2.1 2025)[IGV] Podarcis vaucheri GCA_965113305.1_rPodVau1.hap2.1 SAMEA115336770 PRJEB85074 2025-01-24
244 lizards T.scincoides (rTilSci1hap2 2024)[IGV] Tiliqua scincoides GCF_035046505.1_rTilSci1.hap2 SAMN37319749 PRJNA1014188 2024-01-04
245 loggerhead turtle (hap1 2025 genbank)[IGV] Caretta caretta GCA_965140235.1_rCarCar1.hap1 SAMN46282778 PRJNA1211701 2025-02-13
246 loggerhead turtle (hap1 2025 refseq)[IGV] Caretta caretta GCF_965140235.1_rCarCar1.hap1 SAMN46282778 PRJNA1211701 2025-02-13
247 loggerhead turtle (hap2 2025)[IGV] Caretta caretta GCA_965140275.1_rCarCar1.hap2 SAMN46282778 PRJNA1211702 2025-02-13
248 loggerhead turtle (v1 SJ_126:Eziel1 2022)[IGV] Caretta caretta GCF_023653815.1_GSC_CCare_1.0 SAMN27958248 PRJNA826225 2022-06-07
249 loggerhead turtle (v2 SJ_126:Eziel1 2022)[IGV] Caretta caretta GCF_023653815.2_GSC_CCare_1.0 SAMN27958248 PRJNA826225 2022-06-07
250 Madagascar ground gecko (Pp20150507F 2025)[IGV] Paroedura picta GCF_049243985.1_Ppicta_v3.0 SAMN45069803 PRJNA1191161 2025-04-02
251 mainland tiger snake[IGV] Notechis scutatus GCF_900518725.1_TS10Xv2-PRI SAMEA4800209 PRJEB27871 2018-09-24
252 many-banded krait (BM01 2022)[IGV] Bungarus multicinctus GCA_023653725.1_ASM2365372v1 SAMN17010494 PRJNA682532 2022-06-07
253 marbled electric ray (2025)[IGV] Torpedo marmorata GCA_977017645.1_sTorMar1.1 SAMEA118004786 PRJEB88667 2025-11-08
254 marbled whiptail (SIMRID8450 2020)[IGV] Aspidoscelis marmoratus GCA_014337955.1_AspMar1.0 SAMN06204250 PRJNA360150 2020-08-31
255 marine toad (2024)[IGV] Rhinella marina GCA_900303285.2_aRhiMar1.3 SAMEA104558286 PRJEB24695 2024-06-11
256 meadow viper (alternate hap 2022)[IGV] Vipera ursinii GCA_947247025.1_rVipUrs1.1_alternate_haplotype SAMEA12832258 PRJEB57182 2022-10-30
257 meadow viper (primary hap 2022)[IGV] Vipera ursinii GCA_947247035.1_rVipUrs1.1 SAMEA12832258 PRJEB57183 2022-10-30
258 Mexican burrowing toad (hap1 2024)[IGV] Rhinophrynus dorsalis GCA_037306005.1_aRhiDor1.hap1 SAMN40302865 PRJNA1085474 2024-03-20
259 Mexican burrowing toad (hap2 2024)[IGV] Rhinophrynus dorsalis GCA_037306015.1_aRhiDor1.hap2 SAMN40302865 PRJNA1085475 2024-03-20
260 Mexican gopher tortoise (maternal hap 2022)[IGV] Gopherus flavomarginatus GCA_025201925.1_rGopFla2.mat.asm SAMN24199108 PRJNA794188 2022-09-15
261 Mexican gopher tortoise (WGS:JAMKFC01 2022)[IGV] Gopherus flavomarginatus GCF_025201925.1_rGopFla2.mat.asm SAMN24199108 PRJNA794188 2022-09-15
262 Mexican gopher tortoise (WGS:JAMKFD01 2022)[IGV] Gopherus flavomarginatus GCA_025201965.1_rGopFla2.pat.asm SAMN24199108 PRJNA794189 2022-09-08
263 mimic poison frog (alternate hap 2023)[IGV] Ranitomeya imitator GCA_032442605.1_aRanImi1.alt SAMN32907850 PRJNA1013385 2023-10-06
264 mimic poison frog (primary hap 2023 genbank)[IGV] Ranitomeya imitator GCA_032444005.1_aRanImi1.pri SAMN32907850 PRJNA1013386 2023-10-16
265 mimic poison frog (primary hap 2023 refseq)[IGV] Ranitomeya imitator GCF_032444005.1_aRanImi1.pri SAMN32907850 PRJNA1013386 2023-10-16
266 Mississippi paddlefish[IGV] Polyodon spathula GCF_017654505.1_ASM1765450v1 SAMN09842169 PRJNA484687 2021-03-31
267 Murray river turtle (Brisbane River MOO-44397 2024)[IGV] Emydura macquarii macquarii GCF_026122565.2_CSIRO-AGI_Emac_v2 SAMN30802450 PRJNA879275 2024-07-25
268 Northern rubber boa (HBS 135849 alternate hap 2022)[IGV] Charina bottae GCA_023362785.1_rChaBot1.0.a SAMN26367999 PRJNA824888 2022-05-13
269 Northern rubber boa (HBS 135849 primary hap 2022)[IGV] Charina bottae GCA_023362775.1_rChaBot1.0.p SAMN26367999 PRJNA824889 2022-05-13
270 Northwestern pond turtle (WTP2003 alternate hap 2022)[IGV] Actinemys marmorata GCA_022086895.1_rActMar1.a SAMN21436765 PRJNA778209 2022-02-08
271 Northwestern pond turtle (WTP2003 primary hap 2022)[IGV] Actinemys marmorata GCA_022086475.1_rActMar1.p SAMN21436765 PRJNA778210 2022-02-09
272 nurse shark (FLO180531 2022)[IGV] Ginglymostoma cirratum GCA_024137785.1_ASM2413778v1 SAMN19313282 PRJNA732133 2022-06-30
273 olive python (hap1 2023)[IGV] Liasis olivaceus GCA_030867105.1_rLiaOli1.hap1 SAMN32739907 PRJNA923812 2023-08-24
274 olive python (hap2 2023)[IGV] Liasis olivaceus GCA_030867085.1_rLiaOli1.hap2 SAMN32739907 PRJNA923813 2023-08-24
275 Pacific lamprey (Columbia River large-bodied, stream-maturing ecotype CRITFC18_GStd-0006 2020)[IGV] Entosphenus tridentatus GCA_014621495.2_ETRf_v1 SAMN14476405 PRJNA615919 2020-11-05
276 Pacific ridley (hap1 2025)[IGV] Lepidochelys olivacea GCA_965140295.1_rLepOli2.hap1 SAMN46283035 PRJNA1211705 2025-02-13
277 Pacific ridley (hap1 2025)[IGV] Lepidochelys olivacea GCF_965140295.1_rLepOli2.hap1 SAMN46283035 PRJNA1211705 2025-02-13
278 Pacific ridley (hap2 2025)[IGV] Lepidochelys olivacea GCA_965140255.1_rLepOli2.hap2 SAMN46283035 PRJNA1211706 2025-02-13
279 painted frog (alternate hap 2022)[IGV] Discoglossus pictus GCA_027410455.1_aDisPic1.alt SAMN32227109 PRJNA912128 2022-12-27
280 painted frog (primary hap 2022)[IGV] Discoglossus pictus GCA_027410445.1_aDisPic1.pri SAMN32227109 PRJNA912129 2022-12-28
281 palmate newt (alternate hap 2024)[IGV] Lissotriton helveticus GCA_964258895.1_aLisHel1.1_alternate_haplotype SAMEA110240860 PRJEB79501 2024-09-07
282 palmate newt (primary hap 2024)[IGV] Lissotriton helveticus GCA_964261635.1_aLisHel1.1 SAMEA110240860 PRJEB79500 2024-10-17
283 palmate newt (primary hap 2026)[IGV] Lissotriton helveticus GCA_964261635.2_aLisHel1.2 SAMEA110240860 PRJEB79500 2026-04-10
284 Papuan ground boa (hap1 2024)[IGV] Candoia aspera GCA_035125265.1_rCanAsp1.hap1 SAMN37159891 PRJNA1009781 2024-01-05
285 Papuan ground boa (hap2 2024 genbank)[IGV] Candoia aspera GCA_035149785.1_rCanAsp1.hap2 SAMN37159891 PRJNA1009782 2024-01-18
286 Papuan ground boa (hap2 2024 refseq)[IGV] Candoia aspera GCF_035149785.1_rCanAsp1.hap2 SAMN37159891 PRJNA1009782 2024-01-18
287 Peter's clawed frog (aXenPet1 2024)[IGV] Xenopus petersii GCA_038501915.1_aXenPet1.maternal.cur SAMN39187339 PRJNA1058703 2024-04-29
288 Peter's clawed frog (aXenPet1 2024)[IGV] Xenopus petersii GCA_038501925.1_aXenPet1.paternal.cur SAMN39187339 PRJNA1058702 2024-04-29
289 pitted-shelled turtle (YL-2023 2023 genbank)[IGV] Carettochelys insculpta GCA_033958435.1_ASM3395843v1 SAMN38222597 PRJNA1037723 2023-11-27
290 pitted-shelled turtle (YL-2023 2023 refseq)[IGV] Carettochelys insculpta GCF_033958435.1_ASM3395843v1 SAMN38222597 PRJNA1037723 2023-11-27
291 plains spadefoot toad (alternate hap 2022)[IGV] Spea bombifrons GCA_027382365.2_aSpeBom1.2.alt SAMN28408467 PRJNA838346 2022-12-27
292 plains spadefoot toad (primary hap 2022)[IGV] Spea bombifrons GCA_027358695.2_aSpeBom1.2.pri SAMN28408467 PRJNA838345 2022-12-27
293 plains spadefoot toad (primary hap 2022)[IGV] Spea bombifrons GCF_027358695.1_aSpeBom1.2.pri SAMN28408467 PRJNA838345 2022-12-27
294 pool frog (hap1 2025)[IGV] Pelophylax lessonae GCA_965119305.1_aPelLes1.hap1.1 SAMEA112468029 PRJEB85310 2025-02-11
295 pool frog (hap2 2025)[IGV] Pelophylax lessonae GCA_965119315.1_aPelLes1.hap2.1 SAMEA112468029 PRJEB85311 2025-02-05
296 prickly gecko (False Entrance Well CCM8104 2023)[IGV] Heteronotia binoei GCF_032191835.1_APGP_CSIRO_Hbin_v1 SAMN37280769 PRJNA1013038 2023-09-29
297 Puerto Rican coqui (hap1 2024 refseq)[IGV] Eleutherodactylus coqui GCF_035609145.1_aEleCoq1.hap1 SAMN39150572 PRJNA1057919 2024-01-12
298 Puerto Rican coqui (hap2 2024)[IGV] Eleutherodactylus coqui GCA_035609135.1_aEleCoq1.hap2 SAMN39150572 PRJNA1057918 2024-01-12
299 Puget Sound dogfish (hap1 2025)[IGV] Squalus suckleyi GCA_050613905.1_sSquSuc5.hap1 SAMN47447513 PRJNA1238014 2025-05-29
300 Puget Sound dogfish (sSquSuc3hap2 2025)[IGV] Squalus suckleyi GCA_050613895.1_sSquSuc5.hap2 SAMN47447513 PRJNA1238015 2025-05-29
301 red stingray (2025)[IGV] Hemitrygon akajei GCF_048418815.1_sHemAka1.3 SAMN46069045 PRJNA1206076 2025-03-05
302 red-eared slider turtle[IGV] Trachemys scripta elegans GCF_013100865.1_CAS_Tse_1.0 SAMN12189062 PRJNA552319 2020-05-15
303 reedfish (primary hap 2021)[IGV] Erpetoichthys calabaricus GCA_900747795.4_fErpCal1.3 SAMEA104026374 PRJEB31579 2021-07-07
304 reedfish (v3 alternate hap 2021)[IGV] Erpetoichthys calabaricus GCA_900700845.3_fErpCal1.3_alternate_haplotype SAMEA104026374 PRJEB31582 2021-07-07
305 Reeves's turtle[IGV] Mauremys reevesii GCF_016161935.1_ASM1616193v1 SAMN16454374 PRJNA663192 2020-12-22
306 Riggenbach's reed frog (aHypRig1 alternate hap 2024)[IGV] Hyperolius riggenbachi GCA_040937895.1_aHypRig1.alt SAMN42123895 PRJNA1129094 2024-07-25
307 Riggenbach's reed frog (aHypRig1 primary hap 2024)[IGV] Hyperolius riggenbachi GCF_040937935.1_aHypRig1.pri SAMN42123895 PRJNA1129093 2024-07-30
308 Ringneck snake (HBS135679 primary hap 2022)[IGV] Diadophis punctatus similis GCA_023053685.1_rDiaPun1.0.p SAMN25872410 PRJNA810488 2022-04-19
309 royal ground snake (hap1 2023 refseq)[IGV] Erythrolamprus reginae GCF_031021105.1_rEryReg1.hap1 SAMN32631248 PRJNA921730 2023-08-31
310 royal ground snake (hap2 2023)[IGV] Erythrolamprus reginae GCA_031021085.1_rEryReg1.hap2 SAMN32631248 PRJNA921729 2023-08-30
311 royal ground snake (hap3 2023)[IGV] Erythrolamprus reginae GCA_031001685.1_rEryReg1.hap3 SAMN32631248 PRJNA996865 2023-08-30
312 rufous frog (hap1 2023)[IGV] Leptodactylus fuscus GCA_031893025.1_aLepFus1.hap1 SAMN37055805 PRJNA1007263 2023-09-26
313 rufous frog (hap2 2023 genbank)[IGV] Leptodactylus fuscus GCA_031893055.1_aLepFus1.hap2 SAMN37055805 PRJNA1007264 2023-09-26
314 rufous frog (hap2 2023 refseq)[IGV] Leptodactylus fuscus GCF_031893055.1_aLepFus1.hap2 SAMN37055805 PRJNA1007264 2023-09-26
315 rufous frog (hap2 2026)[IGV] Leptodactylus fuscus GCA_031893055.2_aLepFus1.hap2 SAMN37055805 PRJNA1007264 2026-06-01
316 Sabana Surinam toad (BJE4294 2021)[IGV] Pipa parva GCA_019650415.1_UCB_Ppar_1.0 SAMN12075865 PRJNA588312 2021-08-17
317 San Diegan legless lizard (HBS135921 alternate hap 2023)[IGV] Anniella stebbinsi GCA_029215795.1_rAnnSte1.0.hap2 SAMN33386066 PRJNA938518 2023-03-14
318 San Diegan legless lizard (HBS135921 primary hap 2023)[IGV] Anniella stebbinsi GCA_029215775.1_rAnnSte1.0.hap1 SAMN33386066 PRJNA938519 2023-03-14
319 San Diegan tiger whiptail (alternate hap HBS 135688 2022)[IGV] Aspidoscelis tigris stejnegeri GCA_023333555.1_rAspTig1.0.a SAMN25872408 PRJNA810477 2022-05-11
320 San Diegan tiger whiptail (v1.1 HBS 135688 primary hap 2025)[IGV] Aspidoscelis tigris stejnegeri GCA_023333525.2_rAspTig1.1.pri SAMN25872408 PRJNA810478 2025-03-05
321 San Diego alligator lizard (HBS135686 alternate hap 2022)[IGV] Elgaria multicarinata webbii GCA_023053675.1_rElgMul1.0.a SAMN25872353 PRJNA810482 2022-04-19
322 San Diego alligator lizard (v1.0 HBS135686 primary hap 2022)[IGV] Elgaria multicarinata webbii GCA_023053635.1_rElgMul1.0.p SAMN25872353 PRJNA810483 2022-04-19
323 San Diego alligator lizard (v1.1 HBS135686 primary hap 2024 genbank)[IGV] Elgaria multicarinata webbii GCA_023053635.2_rElgMul1.1.pri SAMN25872353 PRJNA810483 2024-01-04
324 San Diego alligator lizard (v1.1 HBS135686 primary hap 2024 refseq)[IGV] Elgaria multicarinata webbii GCF_023053635.1_rElgMul1.1.pri SAMN25872353 PRJNA810483 2024-01-04
325 San Diego ringneck snake (HBS135679 alternate hap 2022)[IGV] Diadophis punctatus similis GCA_023053665.1_rDiaPun1.0.a SAMN25872410 PRJNA810487 2022-04-19
326 sand lizard (alternate hap 2019)[IGV] Lacerta agilis GCA_009819545.1_rLacAgi1.alt SAMN12629509 PRJNA562019 2019-12-23
327 sand lizard (primary hap 2019)[IGV] Lacerta agilis GCF_009819535.1_rLacAgi1.pri SAMN12629509 PRJNA562018 2019-12-31
328 Sardinian treefrog (hap1 2023 refseq)[IGV] Hyla sarda GCF_029499605.1_aHylSar1.hap1 SAMN32629340 PRJNA921707 2023-04-07
329 Sardinian treefrog (hap2 2023)[IGV] Hyla sarda GCA_029493135.1_aHylSar1.hap2 SAMN32629340 PRJNA921708 2023-03-30
330 Schlegel's Japanese gecko[IGV] Gekko japonicus GCF_001447785.1_Gekko_japonicus_V1.1 SAMN04157958 PRJNA298277 2015-11-25
331 sea lamprey (alternate hap 2020)[IGV] Petromyzon marinus GCA_010993595.1_kPetMar1.alt SAMN12629506 PRJNA562012 2020-02-24
332 sea lamprey (Great Lakes invasive population PM22_M1 alternate hap 2025)[IGV] Petromyzon marinus GCA_048941845.1_UKy_Petmar_22M1.alt1.0 SAMN46926778 PRJNA1226266 2025-03-25
333 sea lamprey (Great Lakes invasive population PM22_M1 primary hap 2025 genbank)[IGV] Petromyzon marinus GCA_048934315.1_UKy_Petmar_22M1.pri1.0 SAMN46926778 PRJNA1226267 2025-03-25
334 sea lamprey (Great Lakes invasive population PM22_M1 primary hap 2025 refseq)[IGV] Petromyzon marinus GCF_048934315.1_UKy_Petmar_22M1.pri1.0 SAMN46926778 PRJNA1226267 2025-03-25
335 sea lamprey (primary hap 2020)[IGV] Petromyzon marinus GCF_010993605.1_kPetMar1.pri SAMN12629506 PRJNA562011 2020-02-24
336 sharpnose sevengill shark (hap1 2024 genbank)[IGV] Heptranchias perlo GCA_035084215.1_sHepPer1.hap1 SAMN38891902 PRJNA1054128 2024-01-05
337 sharpnose sevengill shark (hap1 2024 refseq)[IGV] Heptranchias perlo GCF_035084215.1_sHepPer1.hap1 SAMN38891902 PRJNA1054128 2024-01-05
338 sharpnose sevengill shark (hap2 2024)[IGV] Heptranchias perlo GCA_035084135.1_sHepPer1.hap2 SAMN38891902 PRJNA1054129 2024-01-04
339 sharpnose sevengill shark (hap2 2024)[IGV] Heptranchias perlo GCA_035084135.2_sHepPer1.hap2 SAMN38891902 PRJNA1054129 2024-06-14
340 Shaw's sea snake (ss_UAE728 2024)[IGV] Hydrophis curtus GCA_037043045.1_ASM3704304v1 SAMN23222007 PRJNA780942 2024-03-06
341 Skyros wall lizard (rPodGai1.hap1.2 2024)[IGV] Podarcis gaigeae GCF_964106915.1_rPodGai1.hap1.2 SAMEA114217796 PRJEB76108 2024-09-17
342 Skyros wall lizard (rPodGai1.hap2.1 2024)[IGV] Podarcis gaigeae GCA_964106785.1_rPodGai1.hap2.1 SAMEA114217796 PRJEB76109 2024-06-06
343 Skyros wall lizard (v1 hap1 2024)[IGV] Podarcis gaigeae GCA_964106915.1_rPodGai1.hap1.1 SAMEA114217796 PRJEB76108 2024-06-06
344 Skyros wall lizard (v2 hap1 2024)[IGV] Podarcis gaigeae GCA_964106915.2_rPodGai1.hap1.2 SAMEA114217796 PRJEB76108 2024-09-17
345 small-spotted catshark (primary hap 2021)[IGV] Scyliorhinus canicula GCF_902713615.2_sScyCan1.2 SAMEA994730 PRJEB35945 2021-01-28
346 smaller spotted catshark (alternate hap 2021)[IGV] Scyliorhinus canicula GCA_902713625.2_sScyCan1.2_alternate_haplotype SAMEA994730 PRJEB35944 2021-01-28
347 smaller spotted catshark (v1.2 primary hap 2021 genbank)[IGV] Scyliorhinus canicula GCA_902713615.2_sScyCan1.2 SAMEA994730 PRJEB35945 2021-01-28
348 smalltooth sawfish (alternate hap 2019)[IGV] Pristis pectinata GCA_009764485.1_sPriPec2.alt SAMN12629505 PRJNA562010 2019-12-18
349 smalltooth sawfish (primary hap 2019)[IGV] Pristis pectinata GCA_009764475.2_sPriPec2.1.pri SAMN12629505 PRJNA562009 2019-12-19
350 smalltooth sawfish (v2.1 primary hap 2019 refseq)[IGV] Pristis pectinata GCF_009764475.1_sPriPec2.1.pri SAMN12629505 PRJNA562009 2019-12-19
351 snake N.helvetica (rNatHel1.hap1.1 2024)[IGV] Natrix helvetica GCA_964273705.1_rNatHel1.hap1.1 SAMEA114598156 PRJEB80796 2024-10-05
352 snake N.helvetica (rNatHel1.hap2.1 2024)[IGV] Natrix helvetica GCA_964273795.1_rNatHel1.hap2.1 SAMEA114598156 PRJEB80795 2024-10-04
353 South American lungfish (Aquarium Glaser DD20211129a alternate hap 2024)[IGV] Lepidosiren paradoxa GCA_040438655.1_ASM4043865v1 SAMN26083907 PRJNA808321 2024-07-01
354 Southern California legless lizard (HBS135921 hap1 2026)[IGV] Anniella stebbinsi GCA_051312515.2_rAnnSte1.2_hap1 SAMN33386066 PRJNA1233334 2026-01-27
355 Southern California legless lizard (HBS135921 hap2 2026)[IGV] Anniella stebbinsi GCA_051312545.2_rAnnSte1.2_hap2 SAMN33386066 PRJNA1233338 2026-01-27
356 Southern dwarf chameleon (Gauteng JTBG20232 2024)[IGV] Bradypodion ventrale GCA_035047345.1_BraVen1.1 SAMN35825190 PRJNA986319 2024-01-03
357 Southern Pacific rattlesnake (HBS135844 alternate hap 2022)[IGV] Crotalus helleri GCA_024509165.1_rCroOre1.a SAMN25872349 PRJNA807341 2022-08-03
358 Southern Pacific rattlesnake (HBS135844 primary hap 2022)[IGV] Crotalus helleri GCA_024509115.1_rCroOre1.0.p SAMN25872349 PRJNA807342 2022-08-04
359 Southwestern pond turtle (HBS135687 alternate hap 2022)[IGV] Actinemys pallida GCA_023634275.1_rActPal1.0.a SAMN25872472 PRJNA810503 2022-06-01
360 Southwestern pond turtle (HBS135687 primary hap 2022)[IGV] Actinemys pallida GCA_023634205.1_rActPal1.0.p SAMN25872472 PRJNA810504 2022-06-01
361 spotted gar[IGV] Lepisosteus oculatus GCF_000242695.1_LepOcu1 SAMN00706774 PRJNA68247 2012-01-13
362 spotted gar (fLepOcu1hap1 2024)[IGV] Lepisosteus oculatus GCA_040954845.1_fLepOcu1.hap1 SAMN41155427 PRJNA1106998 2024-08-01
363 spotted gar (fLepOcu1hap2 2024)[IGV] Lepisosteus oculatus GCF_040954835.1_fLepOcu1.hap2 SAMN41155427 PRJNA1106999 2024-08-01
364 spotted gar (hap2 2024)[IGV] Lepisosteus oculatus GCA_040954835.1_fLepOcu1.hap2 SAMN41155427 PRJNA1106999 2024-08-01
365 spotted ratfish (hap1 2024)[IGV] Hydrolagus colliei GCA_035084065.1_sHydCol1.hap1 SAMN39156054 PRJNA1058004 2024-01-05
366 spotted ratfish (hap2 2024)[IGV] Hydrolagus colliei GCA_035084275.1_sHydCol1.hap2 SAMN39156054 PRJNA1058005 2024-01-05
367 starry smooth-hound (sMusAst1.hap1.1 2024)[IGV] Mustelus asterias GCA_964213995.1_sMusAst1.hap1.1 SAMEA114298637 PRJEB78883 2024-08-22
368 starry smooth-hound (sMusAst1.hap2.1 2024)[IGV] Mustelus asterias GCA_964214025.1_sMusAst1.hap2.1 SAMEA114298637 PRJEB78882 2024-08-10
369 starry smooth-hound shark (hap1.1 2024)[IGV] Mustelus asterias GCF_964213995.1_sMusAst1.hap1.1 SAMEA114298637 PRJEB78883 2024-08-22
370 sterlet (v2 Gen_M01 2020)[IGV] Acipenser ruthenus GCF_010645085.2_ASM1064508v2 SAMN12612932 PRJNA561280 2020-02-19
371 Suwannee snapping turtle (hap1 2023)[IGV] Macrochelys suwanniensis GCA_033296515.1_rMacSuw1.hap1 SAMN37052244 PRJNA1006848 2023-11-06
372 Suwannee snapping turtle (hap2 2023)[IGV] Macrochelys suwanniensis GCA_033349115.1_rMacSuw1.hap2 SAMN37052244 PRJNA1006849 2023-11-06
373 tailed frog (A.truei hap1 2024 genbank)[IGV] Ascaphus truei GCA_040206685.1_aAscTru1.hap1 SAMN41155128 PRJNA1106995 2024-06-17
374 tailed frog (A.truei hap1 2024 refseq)[IGV] Ascaphus truei GCF_040206685.1_aAscTru1.hap1 SAMN41155128 PRJNA1106995 2024-06-17
375 tailed frog (A.truei hap2 2024)[IGV] Ascaphus truei GCA_040206675.1_aAscTru1.hap2 SAMN41155128 PRJNA1106993 2024-06-17
376 tarantolino (hap1 2023)[IGV] Euleptes europaea GCA_029931775.1_rEulEur1.hap1 SAMN32622440 PRJNA919166 2023-05-15
377 thorny skate (alternate hap CabotCenter1 2020)[IGV] Amblyraja radiata GCA_010909745.1_sAmbRad1.alt SAMN09948523 PRJNA591368 2020-02-14
378 thorny skate (CabotCenter1 primary hap 2020)[IGV] Amblyraja radiata GCA_010909765.2_sAmbRad1.1.pri SAMN09948523 PRJNA591369 2020-02-21
379 thorny skate (v1.1 primary hap CabotCenter1 2020)[IGV] Amblyraja radiata GCF_010909765.2_sAmbRad1.1.pri SAMN09948523 PRJNA591369 2020-02-21
380 three-toed box turtle[IGV] Terrapene triunguis GCF_002925995.2_T_m_triunguis-2.0 SAMN08285364 PRJNA415469 2018-09-21
381 tiger rattlesnake[IGV] Crotalus tigris GCF_016545835.1_ASM1654583v1 SAMN12497667 PRJNA558767 2021-01-06
382 tiny Cayenne caecilian (alternate hap 2019)[IGV] Microcaecilia unicolor GCA_901765105.1_aMicUni1.1_alternate_haplotype SAMEA104387962 PRJEB32738 2019-07-08
383 tiny cayenne caecilian (primary hap 2021)[IGV] Microcaecilia unicolor GCF_901765095.2_aMicUni1.2 SAMEA104387962 PRJEB32737 2021-04-24
384 tiny Cayenne caecilian (v2 2021)[IGV] Microcaecilia unicolor GCA_901765095.2_aMicUni1.2 SAMEA104387962 PRJEB32737 2021-04-24
385 tope shark (hap1 2025)[IGV] Galeorhinus galeus GCA_977071755.1_sGalGal3_haplotype_1_assembly_v1 SAMEA120588772 PRJEB104278 2025-12-05
386 tope shark (hap2 2025)[IGV] Galeorhinus galeus GCA_977071745.1_sGalGal3_haplotype_2_assembly_v1 SAMEA120588772 PRJEB104279 2025-12-05
387 Townsend's dwarf sphaero (gecko TG3544 2022)[IGV] Sphaerodactylus townsendi GCF_021028975.2_MPM_Stown_v2.3 SAMN20179316 PRJNA746057 2022-04-08
388 tropical clawed frog[IGV] Xenopus tropicalis GCF_000004195.4_UCB_Xtro_10.0 SAMN13041969 PRJNA577946 2019-11-14
389 Tungara frog (aEngPut4 maternal hap 2024 refseq)[IGV] Engystomops pustulosus GCF_040894005.1_aEngPut4.maternal SAMN42463661 PRJNA1135147 2024-07-30
390 Tungara frog (aEngPut4 paternal hap 2024)[IGV] Engystomops pustulosus GCA_040894015.1_aEngPut4.paternal SAMN42463661 PRJNA1135146 2024-07-30
391 turtles (alternate hap 2025)[IGV] Hydromedusa tectifera GCA_049999975.1_rHydTec1.alt SAMN47848211 PRJNA1248029 2025-04-29
392 turtles (alternate hap 2025)[IGV] Pelomedusa somalica GCA_051311595.1_rPelSom1.alt SAMN49883935 PRJNA1289188 2025-07-14
393 turtles (alternate hap 2025)[IGV] Chitra chitra GCA_052575425.1_rChiChi1.alt SAMN50608594 PRJNA1305518 2025-09-12
394 turtles (hap1 2025)[IGV] Dermatemys mawii GCA_054099655.1_rDerMaw1.hap1 SAMN52921036 PRJNA1348907 2025-12-18
395 turtles (MuskTurtle02 alternate hap 2023)[IGV] Sternotherus odoratus GCA_032164215.1_rSteOdo2_a1.0 SAMN36942441 PRJNA1016401 2023-09-28
396 turtles (primary hap 2025)[IGV] Hydromedusa tectifera GCA_049999965.1_rHydTec1.pri SAMN47848211 PRJNA1248028 2025-04-29
397 turtles (primary hap 2025)[IGV] Pelomedusa somalica GCA_051311615.1_rPelSom1.pri SAMN49883935 PRJNA1289187 2025-07-14
398 turtles (primary hap 2025)[IGV] Chitra chitra GCA_052575445.1_rChiChi1.pri SAMN50608594 PRJNA1305517 2025-09-12
399 two-lined caecilian (alternate hap 2019)[IGV] Rhinatrema bivittatum GCA_901001175.1_aRhiBiv1.1_alternate_haplotype SAMEA104387956 PRJEB32112 2019-06-02
400 two-lined caecilian (v1.2 2021 genbank)[IGV] Rhinatrema bivittatum GCA_901001135.2_aRhiBiv1.2 SAMEA104387956 PRJEB32111 2021-04-24
401 Tyrrhenian wall lizard (hap1 2025)[IGV] Podarcis tiliguerta GCA_965153285.1_rPodTil1.hap1.1 SAMEA114217799 PRJEB85968 2025-02-26
402 Tyrrhenian wall lizard (hap1.1 2025)[IGV] Podarcis tiliguerta GCF_965153285.1_rPodTil1.hap1.1 SAMEA114217799 PRJEB85968 2025-02-26
403 Tyrrhenian wall lizard (hap2 2025)[IGV] Podarcis tiliguerta GCA_965153305.1_rPodTil1.hap2.1 SAMEA114217799 PRJEB85969 2025-02-26
404 valley gartersnake (HBS 135685 alternate hap 2023)[IGV] Thamnophis sirtalis fitchi GCA_029207655.1_rThaSir1.0.hap2 SAMN26367981 PRJNA913137 2023-03-14
405 valley gartersnake (HBS 135685 primary hap 2023)[IGV] Thamnophis sirtalis fitchi GCA_029207665.1_rThaSir1.0.hap1 SAMN26367981 PRJNA913138 2023-03-14
406 viviparous/common lizard[IGV] Zootoca vivipara GCF_011800845.1_UG_Zviv_1 SAMN14329711 PRJNA610958 2020-04-01
407 warty newt (alternate hap 2024)[IGV] Triturus cristatus GCA_964204665.1_aTriCri1.1_alternate_haplotype SAMEA112468129 PRJEB78382 2024-07-28
408 warty newt (primary hap 2024)[IGV] Triturus cristatus GCA_964204655.1_aTriCri1.1 SAMEA112468129 PRJEB78383 2024-07-31
409 West African lungfish (Aquarium Glaser DD20220218a alternate hap 2024)[IGV] Protopterus annectens GCA_040939495.1_ASM4093949v1 SAMN26533844 PRJNA813994 2024-07-29
410 West African lungfish (Aquarium Glaser DD20220218a primary hap 2024)[IGV] Protopterus annectens GCA_040939525.1_ASM4093952v1 SAMN26533844 PRJNA813995 2024-08-01
411 West African lungfish (FY-2018-M 2021)[IGV] Protopterus annectens GCF_019279795.1_PAN1.0 SAMN17890435 PRJNA701604 2021-07-20
412 western fence lizard (IW3139 2022)[IGV] Sceloporus occidentalis GCA_023333635.1_rSceOcc1.0.a SAMN27480378 PRJNA824882 2022-05-11
413 western fence lizard (IW3139 primary hap 2022)[IGV] Sceloporus occidentalis GCA_023333645.1_rSceOcc1.0.p SAMN27480378 PRJNA824883 2022-05-11
414 western painted turtle (hap1 R12L10 2024)[IGV] Chrysemys picta bellii GCA_035221575.1_ASM3522157v1 SAMN13293682 PRJNA961174 2024-01-08
415 western painted turtle (hap2 R12L10 2024)[IGV] Chrysemys picta bellii GCA_035221595.1_ASM3522159v1 SAMN13293682 PRJNA961173 2024-01-08
416 western painted turtle (R12L10 2023 refseq)[IGV] Chrysemys picta bellii GCF_011386835.1_ASM1138683v2 SAMN13293682 PRJNA589899 2023-09-08
417 western painted turtle (v5 RCT428 2020)[IGV] Chrysemys picta bellii GCF_000241765.5_Chrysemys_picta_BioNano-3.0.4 SAMN02713681 PRJNA78657 2020-08-21
418 western red-tailed skink (HBS 135693 alternate hap 2022)[IGV] Plestiodon gilberti rubricaudatus GCA_026170595.1_rPleGil1.0.hap2 SAMN30523592 PRJNA874060 2022-11-14
419 western red-tailed skink (HBS 135693 primary hap 2022)[IGV] Plestiodon gilberti rubricaudatus GCA_026170395.1_rPleGil1.0.hap1 SAMN30523592 PRJNA874061 2022-11-14
420 western spadefoot toad (hap1 HBS 135690 2023)[IGV] Spea hammondii GCA_029215705.1_aSpeHam1.0.hap1 SAMN33386125 PRJNA938521 2023-03-15
421 western spadefoot toad (hap2 HBS 135690 2023)[IGV] Spea hammondii GCA_029215755.1_aSpeHam1.0.hap2 SAMN33386125 PRJNA938520 2023-03-14
422 western terrestrial garter snake (alternate hap 2019)[IGV] Thamnophis elegans GCA_009769695.1_rThaEle1.alt SAMN12629499 PRJNA561997 2019-12-19
423 western terrestrial garter snake (primary hap 2019)[IGV] Thamnophis elegans GCA_009769535.1_rThaEle1.pri SAMN12629499 PRJNA561996 2019-12-23
424 western terrestrial garter snake (primary hap 2019)[IGV] Thamnophis elegans GCF_009769535.1_rThaEle1.pri SAMN12629499 PRJNA561996 2019-12-23
425 whale shark (14 2022 Squalomix)[IGV] Rhincodon typus GCF_021869965.1_sRhiTyp1.1 SAMN19519256 PRJNA703743 2022-02-03
426 whale shark (Ralph 2017 Emory U)[IGV] Rhincodon typus GCF_001642345.1_ASM164234v2 SAMN04562461 PRJNA255419 2017-03-03
427 whitespotted bambooshark[IGV] Chiloscyllium plagiosum GCF_004010195.1_ASM401019v2 SAMN09508879 PRJNA478295 2019-01-10
428 whitespotted bambooshark (BGI_BamShark_2017 2019)[IGV] Chiloscyllium plagiosum GCA_004010195.1_ASM401019v1 SAMN09508879 PRJNA478295 2019-01-10
429 yellow-bellied toad (maternal hap 2024)[IGV] Bombina variegata GCA_964205305.1_aBomVar4.maternal.1 SAMEA112651403 PRJEB76885 2024-07-29
430 yellow-bellied toad (paternal hap 2024)[IGV] Bombina variegata GCA_964205295.1_aBomVar4.paternal.1 SAMEA112651403 PRJEB76886 2024-07-29
431 yellow-spotted Amazon River turtle (alternate hap 2025)[IGV] Podocnemis unifilis GCA_050000025.1_rPodUni1.alt SAMN47848212 PRJNA1248031 2025-04-29
432 yellow-spotted Amazon River turtle (primary hap 2025)[IGV] Podocnemis unifilis GCA_050000005.1_rPodUni1.pri SAMN47848212 PRJNA1248030 2025-04-29
433 yellowpond turtle (Southern MM-2020 2021)[IGV] Mauremys mutica GCF_020497125.1_ASM2049712v1 SAMN19136605 PRJNA729638 2021-10-14
434 zebra shark (6-17 2022 Squalomix)[IGV] Stegostoma tigrinum GCF_022316705.1_sSteFas1.1 SAMN18022887 PRJNA703743 2022-02-17
435 zebra shark (hap1 2023 refseq)[IGV] Stegostoma tigrinum GCF_030684315.1_sSteTig4.hap1 SAMN35823397 PRJNA986595 2023-08-08
436 zebra shark (hap2 2023)[IGV] Stegostoma tigrinum GCA_030684295.1_sSteTig4.hap2 SAMN35823397 PRJNA986594 2023-08-07
437 Zimmermann's poison frog (hap1 2025 genbank)[IGV] Ranitomeya variabilis GCA_051348905.1_aRanVar5.hap1 SAMN49084325 PRJNA1276888 2025-07-15
438 Zimmermann's poison frog (hap1 2025 refseq)[IGV] Ranitomeya variabilis GCF_051348905.1_aRanVar5.hap1 SAMN49084325 PRJNA1276888 2025-07-15

Additional hubs with collections of assemblies
Collection Hub index pages: Assembly statistics: Track statistics:
Primates 617 assemblies assembly stats track stats
Mammals 875 assemblies assembly stats track stats
Birds 568 assemblies assembly stats track stats
Fishes 689 assemblies assembly stats track stats
other vertebrates 438 assemblies assembly stats track stats
Invertebrates 1954 assemblies assembly stats track stats
Plants 446 assemblies assembly stats track stats
Fungi 4128 assemblies assembly stats track stats
Viruses 15063 assemblies assembly stats track stats
Archaea 2702 assemblies assembly stats track stats
Bacteria 22351 assemblies assembly stats track stats
legacy/superseded 691 assemblies assembly stats track stats
collections below are subsets of the assemblies above
VGP - Vertebrate Genome Project 1303 assemblies assembly stats track stats
CCGP - The California Conservation Genomics Project 126 assemblies assembly stats track stats
HPRC - Human Pangenome Reference Consortium 464 assemblies assembly stats track stats
BRC - BRC Analytics - Bioinformatics Research Center 5519 assemblies assembly stats track stats