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  Chromosome 10 - Summary - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Summary Page Whole Chromosome Single Contigs

Cell color code:

ColorGenetic, YAC, RHBAC End PairsClone Overlaps
WhiteNo markers placedAll clone bridges in same contigBest overlap with succeeding clone or no overlaps
BlueMarker consistent with alignment of STS mapClone bridges two adjacent contigs 
GreenMarker slightly inconsistent with alignment of STS mapClone bridges close contigsOverlap with non-adjacent clone in same contig
PinkMarker inconsistent with STS map, same chromosomeMulitple clones bridge to distant contig, same chromosomeOverlap with clone on different contig, same chromosome
RedMarker inconsistent with STS map, different chromosomeMulitple clones bridge to contig on different chromosomeOverlap with clone on different chromosome
YellowMarker not placed on any accession in contig, but alignment with STS map indicates it is in contig Overlap with clone not used in assembly

NT_024115 NT_024081 NT_033983 NT_033894 NT_033916 NT_008705 NT_033921 NT_033986
NT_033892 NT_033226 NT_033223 NT_033227 NT_033912 NT_033982 NT_033988 NT_033896
NT_024133 NT_033987 NT_033985 NT_031847 NT_030066 NT_030772 NT_033228 NT_008646
NT_017696 NT_031860 NT_033898 NT_033920 NT_008748 NT_033222 NT_033990 NT_024085
NT_033984 NT_008797 NT_033897 NT_008583 NT_033220 NT_033891 NT_033895 NT_033917
NT_033989 NT_033918 NT_033919 NT_033893 NT_024037 NT_030075 NT_033890 NT_024064
NT_030070 NT_008769 NT_033229 NT_030059 NT_008818 NT_033221 NT_031855 NT_031856
NT_008902 NT_030764 NT_027097 NT_024086 NT_025835 NT_033224 NT_033225 NT_024040
NT_017795 NT_028298


  NT_024064
 
ContigAccStartPhsGenetic MapsYAC MapRH MapsBAC endsOverlap
NT_024064AC0223898753623111 blue
 none 5 blue
4 green
1 pink
 13 confirm
 11452 strong
NT_024064AC074321876259281none 1 blue
 3 blue
1 green
 9 confirm
 50308 strong
NT_024064AL3561158782164131 blue
 none 2 blue
 13 confirm
 1996 medium
NT_024064AL389916878533193none none none 4 confirm
 1997 medium
NT_024064AL591128879198863none none none 6 confirm
 2000 strong
NT_024064AL590136879748673none none none 8 confirm
 0 weak
1 yellow
NT_024064AC091487880337361none none none 23 confirm
 37766 strong
1 yellow
NT_024064AL357394882469383none none none 18 confirm
 2000 strong
1 yellow
NT_024064AL358787883950223none none none 17 confirm
 0 weak
2 yellow
NT_024064AL596267885110563none none none 2 confirm
 2000 strong
NT_024064AL5005268852591331 green
 2 blue
 2 blue
 18 confirm
5 pink
 129710 strong
1 yellow
NT_024064AC025428886990921none none none 4 confirm
1 pink
 24469 strong
1 yellow
NT_024064AC037454887442811none none none 3 confirm
6 pink
 0 weak
1 green
NT_024064AC073162887542651none none none 6 confirm
12 pink
 1998 medium
1 yellow
NT_024064AL596135889381093none none none 1 confirm
 1994 medium
NT_024064AC0220288904590631 blue
 1 blue
 none 8 confirm
 0 weak
1 green
NT_024064AL603756892030263none none none 1 confirm
 2001 strong
NT_024064AC0223948924051632 blue
 2 blue
 2 blue
 6 confirm
1 pink
 1994 medium
NT_024064AL3907868943264932 blue
 1 blue
 none 4 confirm
8 pink
 0 weak
NT_024064-  0 yellow
 0 yellow
 1 yellow