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  Chromosome 10 - Summary - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Summary Page Whole Chromosome Single Contigs

Cell color code:

ColorGenetic, YAC, RHBAC End PairsClone Overlaps
WhiteNo markers placedAll clone bridges in same contigBest overlap with succeeding clone or no overlaps
BlueMarker consistent with alignment of STS mapClone bridges two adjacent contigs 
GreenMarker slightly inconsistent with alignment of STS mapClone bridges close contigsOverlap with non-adjacent clone in same contig
PinkMarker inconsistent with STS map, same chromosomeMulitple clones bridge to distant contig, same chromosomeOverlap with clone on different contig, same chromosome
RedMarker inconsistent with STS map, different chromosomeMulitple clones bridge to contig on different chromosomeOverlap with clone on different chromosome
YellowMarker not placed on any accession in contig, but alignment with STS map indicates it is in contig Overlap with clone not used in assembly

NT_024115 NT_024081 NT_033983 NT_033894 NT_033916 NT_008705 NT_033921 NT_033986
NT_033892 NT_033226 NT_033223 NT_033227 NT_033912 NT_033982 NT_033988 NT_033896
NT_024133 NT_033987 NT_033985 NT_031847 NT_030066 NT_030772 NT_033228 NT_008646
NT_017696 NT_031860 NT_033898 NT_033920 NT_008748 NT_033222 NT_033990 NT_024085
NT_033984 NT_008797 NT_033897 NT_008583 NT_033220 NT_033891 NT_033895 NT_033917
NT_033989 NT_033918 NT_033919 NT_033893 NT_024037 NT_030075 NT_033890 NT_024064
NT_030070 NT_008769 NT_033229 NT_030059 NT_008818 NT_033221 NT_031855 NT_031856
NT_008902 NT_030764 NT_027097 NT_024086 NT_025835 NT_033224 NT_033225 NT_024040
NT_017795 NT_028298


  NT_033226
 
ContigAccStartPhsGenetic MapsYAC MapRH MapsBAC endsOverlap
NT_033226AL590070262119921none none none 1 confirm
 0 weak
2 green
NT_033226AC012045262160121none none none 9 confirm
9 blue
 44416 strong
2 pink
NT_033226AL591683263109381none none none 0 confirm
 27015 strong
1 pink
NT_033226AL3586122649811932 blue
 none none 18 confirm
8 blue
 2000 strong
1 green
NT_033226AL3918122655769031 blue
 1 blue
 1 blue
 12 confirm
 2000 strong
1 green
NT_033226AL360217265788163none none none 10 confirm
 2000 strong
1 yellow
NT_033226AL1625032669090431 blue
 1 blue
 5 blue
 25 confirm
 0 weak
2 yellow
NT_033226AL355798267985823none 1 blue
 none 14 confirm
 0 weak
1 yellow
NT_033226AL1602872693467831 blue
 2 blue
 1 blue
 19 confirm
 0 weak
2 yellow
NT_033226AL390961270659963none none 3 blue
 27 confirm
 2000 strong
3 yellow
NT_033226AL1394042728741432 blue
 2 blue
 2 blue
 17 confirm
 2000 strong
3 yellow
NT_033226AL365501273588593none none 1 pink
 14 confirm
 0 weak
1 yellow
NT_033226AL162272274297483none none 6 blue
2 pink
 18 confirm
1 pink
 27377 strong
NT_033226AL160291275826522none none 4 blue
1 pink
 16 confirm
3 green
5 pink
 56353 strong
1 yellow
NT_033226AL390916277366151none none none 2 confirm
3 green
1 pink
 69887 strong
1 pink
1 yellow
NT_033226AC0058752781177731 blue
 2 blue
 2 blue
 8 confirm
8 green
6 pink
 0 weak
2 pink
NT_033226-  2 yellow
 2 yellow
 2 yellow