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  Chromosome 10 - Summary - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Summary Page Whole Chromosome Single Contigs

Cell color code:

ColorGenetic, YAC, RHBAC End PairsClone Overlaps
WhiteNo markers placedAll clone bridges in same contigBest overlap with succeeding clone or no overlaps
BlueMarker consistent with alignment of STS mapClone bridges two adjacent contigs 
GreenMarker slightly inconsistent with alignment of STS mapClone bridges close contigsOverlap with non-adjacent clone in same contig
PinkMarker inconsistent with STS map, same chromosomeMulitple clones bridge to distant contig, same chromosomeOverlap with clone on different contig, same chromosome
RedMarker inconsistent with STS map, different chromosomeMulitple clones bridge to contig on different chromosomeOverlap with clone on different chromosome
YellowMarker not placed on any accession in contig, but alignment with STS map indicates it is in contig Overlap with clone not used in assembly

NT_024115 NT_024081 NT_033983 NT_033894 NT_033916 NT_008705 NT_033921 NT_033986
NT_033892 NT_033226 NT_033223 NT_033227 NT_033912 NT_033982 NT_033988 NT_033896
NT_024133 NT_033987 NT_033985 NT_031847 NT_030066 NT_030772 NT_033228 NT_008646
NT_017696 NT_031860 NT_033898 NT_033920 NT_008748 NT_033222 NT_033990 NT_024085
NT_033984 NT_008797 NT_033897 NT_008583 NT_033220 NT_033891 NT_033895 NT_033917
NT_033989 NT_033918 NT_033919 NT_033893 NT_024037 NT_030075 NT_033890 NT_024064
NT_030070 NT_008769 NT_033229 NT_030059 NT_008818 NT_033221 NT_031855 NT_031856
NT_008902 NT_030764 NT_027097 NT_024086 NT_025835 NT_033224 NT_033225 NT_024040
NT_017795 NT_028298


  NT_024085
 
ContigAccStartPhsGenetic MapsYAC MapRH MapsBAC endsOverlap
NT_024085AL691514582403441none none none 2 confirm
 36616 strong
2 yellow
NT_024085AC068921583947721none none none 5 confirm
 0 weak
1 yellow
NT_024085AL3573535855442131 blue
 1 blue
 none 12 confirm
8 blue
 0 weak
1 yellow
NT_024085AC025427585630043none none none 18 confirm
3 blue
 1992 medium
1 yellow
NT_024085AL607130587455573none none none 1 confirm
 2000 strong
NT_024085AC0731735876083732 blue
 3 blue
 1 green
 20 confirm
 41695 strong
1 yellow
NT_024085AC010996589064163none none 3 blue
 18 confirm
 25267 strong
NT_024085AC018508590341173none none none 10 confirm
 76030 strong
NT_024085AC0250395919919431 blue
 2 blue
 none 9 confirm
 20492 strong
1 yellow
NT_024085AC068061592554643none none none 21 confirm
 2000 strong
1 yellow
NT_024085AL139122594249703none none none 10 confirm
 2000 strong
NT_024085AL512632595177293none none none 10 confirm
 27740 strong
NT_024085AC012559595577391none none none 14 confirm
 18095 strong
NT_024085AC0263935975892431 blue
 1 blue
 none 20 confirm
 91866 strong
1 yellow
NT_024085AC0690265993363131 blue
 none none 7 confirm
 69072 strong
1 yellow
NT_024085AC0225415996879131 blue
 none none 11 confirm
 6729 strong
NT_024085AL592155600361153none none none 4 confirm
 0 weak
NT_024085-  0 yellow
 0 yellow
 0 yellow